Agrobacterium vitis VAT03-9: RvVAT039_27250
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Entry
RvVAT039_27250 CDS
T08809
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAT039_27250 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avv01007
]
RvVAT039_27250 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avv03016
]
RvVAT039_27250 (cysS)
Enzymes [BR:
avv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
RvVAT039_27250 (cysS)
Amino acid related enzymes [BR:
avv01007
]
Aminoacyl-tRNA synthetase
Class I (G)
RvVAT039_27250 (cysS)
Transfer RNA biogenesis [BR:
avv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RvVAT039_27250 (cysS)
Prokaryotic type
RvVAT039_27250 (cysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
CysS_C
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
DALR_2
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
BCH65509
LinkDB
All DBs
Position
1:complement(2968670..2970055)
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AA seq
461 aa
AA seq
DB search
MAEGLKLYNTLTRSKVDFTPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLYRLLRHI
YGENHVTYARNITDVDDKINARALRDFPDLPLNEAIAKVTQKTADQFHADVAVLGNLPPT
IEPRATDNIQQMIDIIKTLIAKGHAYVAEGEVLFDTRSMAAYGQLSKRNLDEQQAGARIA
VEAHKKHPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGEVFDIHGGGLDL
IFPHHENEIAQSCCANDTSVMANVWMHNGFVQVEGRKMSKSDGNFFTINELLDTENFGGR
KWPGEVLRLAMLMTHYREPIDFSVKRLEEAERLIAKWPTGGTDDAAPDQTVLDALADDLN
TVAAVQALHALASAANSDPSKLPAFVASAALLGLTQKKADVSDDLSAAIDALVEMRLEML
KTKNFAEADKIRDDLLAKGIQLKDGKSKDTGERVTTWEVKR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggcctcaagctttacaacacactgacgcgcagcaaggttgatttcaccccg
atcgaccccaaaaacgtgcgcatgtatgtctgcggcccaacggtttatgattttgcccat
atcggcaatgcccggccggttattgtctttgacgtgctctaccggctgctacgtcacatc
tatggcgaaaaccacgtcacctatgcccgcaacatcaccgatgtcgatgacaagatcaat
gcgcgggcgctccgggactttcccgatctgccgctgaatgaggcgattgccaaggtgacg
caaaagacggcggatcagttccacgccgatgtggcggtactcggtaacttgccgccgacc
atcgagccgcgcgccaccgacaatatccagcagatgattgacatcatcaagacgctgatt
gccaagggccatgcctatgtggcggaaggtgaagtgctgtttgacacgcggtccatggcc
gcttacggccagctttccaagcgcaatctggatgagcaacaggcaggcgcacgcatcgct
gtcgaggcccataaaaagcatcccggtgatttcgtgctgtggaagctctcaagccataac
gaacccggctgggaaagcccatggggccgaggccgtcctggctggcatatcgaatgctcg
gcaatgtcaaagcgctatctgggcgaggttttcgacattcacggcggcgggctggacctg
attttcccccaccacgaaaacgaaattgcccaatcctgctgcgccaacgacaccagcgtg
atggccaatgtgtggatgcacaatggcttcgtgcaggtggaaggccgcaagatgtcgaaa
tcggatggcaacttcttcaccatcaacgaattgctggacacggagaatttcggcggtcgc
aaatggccgggcgaagtgctgcggctggcgatgctgatgacccattaccgtgagccgatt
gatttttcggtgaagcggttggaagaagcggagcggctgattgccaaatggccaacaggc
ggaacagacgatgccgcgccagatcaaactgtgctggatgcactggcggatgacctgaac
acggtggccgccgtgcaggctctgcatgcgcttgcatctgccgccaatagcgatccatcc
aagcttccggccttcgttgccagcgctgctttgcttgggctcacacaaaagaaggcggat
gttagtgatgatctctctgccgccatcgacgcccttgtcgagatgcgccttgaaatgctg
aagaccaaaaactttgccgaggccgacaagatccgcgacgatcttttggcaaagggcatt
cagttgaaagacggaaagagcaaggacaccggcgagcgcgtgaccacctgggaggtcaag
cggtaa
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