KEGG   Agrobacterium vitis VAT03-9: RvVAT039_28060
Entry
RvVAT039_28060    CDS       T08809                                 
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
avv  Agrobacterium vitis VAT03-9
Pathway
avv00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:avv00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RvVAT039_28060 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:avv01007]
    RvVAT039_28060 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:avv03016]
    RvVAT039_28060 (aspS)
   03029 Mitochondrial biogenesis [BR:avv03029]
    RvVAT039_28060 (aspS)
Enzymes [BR:avv01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     RvVAT039_28060 (aspS)
Amino acid related enzymes [BR:avv01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   RvVAT039_28060 (aspS)
Transfer RNA biogenesis [BR:avv03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    RvVAT039_28060 (aspS)
 Prokaryotic type
   Other AARSs
    RvVAT039_28060 (aspS)
Mitochondrial biogenesis [BR:avv03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    RvVAT039_28060 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon GAD tRNA-synt_2b
Other DBs
NCBI-ProteinID: BCH65590
LinkDB
Position
1:3055906..3057711
AA seq 601 aa
MHRYRSHTCAALRKSDVGATVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK
LAETVRGEWVIRIDGVVKARADETVNKAMQTGEIELYAQEIEILAVAKELPLPVFGEPDY
PEDVRLKYRFIDLRRETLHKNIVKRTQIISSMRNGMSELGFAEYTTPILTASSPEGARDF
LVPSRIHEGQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE
MSFVTQEDVWTTMEPMMTKVFEQFAEGKPVTKQWPRIPYDEAIRKYGSDKPDLRNPVVMQ
AVTEHFADSGFKIFASMIAANPKVEVWAIPVKHTEATGAIGRAVCDRMNAWAQSTGQPGL
GYIFWKEEDGKVAGSGPLAKNIGEERTAAIAAQLGLGAGDACFFVAGDPAKFYKFAGEAR
TRAGEELNLIDRDRFEMCWIVDFPFYEWSEEEKKIDFAHNPFSMPQGGLEAFDSQDPLTL
KAYQYDAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQTDVEERFGGLYRAFQYGAPPHG
GCAFGIDRVVMLLVGAKNLREISLFPMNQQAQDLLMGAPAPATPTQLRELALRVVPTPKK
D
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgcatcgttatcgcagccacacctgtgccgctctccgcaagtccgatgttggtgccacc
gtgcgcctttccggctgggtccaccgcgtccgcgaccacggcggcgttctcttcatcgac
cttcgtgaccattacggcatcacgcaggtggtggccgatcccgatagcccggccttcaaa
ctggctgagaccgtgcgcggcgaatgggtgatccgcatcgatggcgtggtcaaggcccgc
gccgatgagaccgtcaacaaggccatgcaaaccggcgagattgagctttatgcgcaggaa
atcgaaattctcgccgtcgccaaggaattgccgctgccggtgtttggcgagccggactat
ccggaagatgtgcgcctgaagtaccgcttcatcgaccttcgtcgcgaaaccctgcacaag
aacatcgtcaagcgcacccagatcatttcgtccatgcgcaacggcatgagtgagcttggc
tttgccgaatacaccacgccaatcctgaccgcctcttcgccagaaggtgcgcgcgacttc
ttggtgccaagccgtatccatgaaggccagttcttcgcgctgccgcaggctccgcagcaa
tataagcagctgttgatggtggccggtttcgaccgctacttccagattgcaccctgcttc
cgcgatgaagacccgcgtgccgaccgcctgccgggcgagttctaccagctcgacgttgaa
atgagcttcgtgacccaggaagatgtctggaccacgatggaaccgatgatgaccaaggtg
ttcgaacagtttgccgaaggtaagcccgtgacgaagcaatggccacgcattccctatgat
gaagccatccgcaaatacggctccgacaagccagacctgcgcaaccctgttgtcatgcag
gccgtgaccgagcatttcgctgattcaggcttcaagatttttgcaagcatgattgccgcc
aacccgaaggttgaggtctgggcgatcccggtcaagcatacggaagcaacgggcgcgatt
ggccgcgccgtttgcgaccgcatgaatgcctgggcgcagtccaccggccagccgggcctt
ggctatatcttctggaaggaagaagacggcaaggttgccggttccggccccttggccaag
aacattggcgaagagcgcaccgccgccattgccgcccagctcggccttggcgctggcgat
gcctgcttcttcgtcgccggtgatccggccaagttctataagttcgctggcgaagcccgc
acccgtgcaggtgaagagctgaaccttattgaccgcgaccggtttgaaatgtgctggatt
gtggacttcccgttctacgaatggagcgaggaagaaaagaagatcgacttcgcccacaac
ccgttctccatgccgcagggcgggttggaagccttcgacagccaagacccgctgacactc
aaggcttaccaatatgacgccgtctgcaacggctttgaaatcgcttccggctcgatccgt
aaccagtcgccagaactgatggtcaaggcgttcgagaaggttggtctcagccagacggac
gtggaagaacgcttcggcggcctctaccgcgccttccaatacggcgcaccgccgcatggc
ggctgcgcattcggtatcgaccgcgtggtcatgctgctggtgggcgccaagaacctgcgc
gaaatctcgctgttcccgatgaaccagcaggcgcaggatctgttgatgggcgcaccggct
ccggcaacgccgacccagctgcgcgaattggcgttgcgcgtggtgccgacgccgaagaaa
gactga

DBGET integrated database retrieval system