Agrobacterium vitis VAT03-9: RvVAT039_29790
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Entry
RvVAT039_29790 CDS
T08809
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RvVAT039_29790 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
avv03011
]
RvVAT039_29790 (rpsC)
Ribosome [BR:
avv03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RvVAT039_29790 (rpsC)
Bacteria
RvVAT039_29790 (rpsC)
Archaea
RvVAT039_29790 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_NusA_2nd
KH_KhpA-B
KH_1
DUF3253
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
BCH65763
LinkDB
All DBs
Position
1:3241381..3242094
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AA seq
237 aa
AA seq
DB search
MGQKINPIGFRLGINRTWDSRWFADNAEYGKLLHEDLKIRAYLMDELKQAGIAKVVIERP
HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI
AQQLERRIAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA
DIDYGVAEATTAYGICGIKVWIFKGEILEHDPMASERRALESDAQGGNNNNRRRENA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaaatcaatccaatcggtttccgcctgggcattaacaggacctgggatagc
cgttggttcgccgacaacgctgaatacggcaagcttcttcatgaagacctgaagatccgc
gcctatttgatggatgagctgaagcaggccggtatcgccaaggtcgttatcgagcgtccg
cacaagaagtgccgcgtcacgatccactcggcgcgtccgggcctgatcatcggcaagaag
ggtgcagacatcgaaaagcttcgcaagaagctttccgaaatgaccaattccgaaacgcac
ctcaacattgttgaagtgcgcaagccggaagtcgatgcaacgctggtcgctcagtcgatc
gcccagcagctcgagcgccgtatcgcgttccgtcgtgccatgaagcgcgccgtacagtcc
gccatgcgtctgggtgccgaaggcatcaagatcacctgcgctggccgtctcggtggtgcc
gaaatcgctcgtacggaatggtaccgcgaaggtcgcgtgccgcttcatacgctgcgtgcc
gatatcgattacggtgtagcggaagctacaaccgcttatggtatttgcggcatcaaggtc
tggatcttcaagggcgaaatccttgagcatgatccaatggcctccgagcgccgggcgctg
gaaagcgacgcccaaggcggcaacaacaacaaccgtcgtcgcgagaacgcctga
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