Agrobacterium vitis VAT03-9: RvVAT039_30300
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Entry
RvVAT039_30300 CDS
T08809
Symbol
icdA
Name
(GenBank) isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00020
Citrate cycle (TCA cycle)
avv00480
Glutathione metabolism
avv00720
Other carbon fixation pathways
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
avv01210
2-Oxocarboxylic acid metabolism
avv01230
Biosynthesis of amino acids
avv04146
Peroxisome
Module
avv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
avv_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RvVAT039_30300 (icdA)
09102 Energy metabolism
00720 Other carbon fixation pathways
RvVAT039_30300 (icdA)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RvVAT039_30300 (icdA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RvVAT039_30300 (icdA)
Enzymes [BR:
avv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RvVAT039_30300 (icdA)
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
BCH65814
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All DBs
Position
1:complement(3288215..3289429)
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AA seq
404 aa
AA seq
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MQKIKVANPVVDLDGDEMTRIIWQFIKEKLILPYLDLEIEYYDLSVENRDATNDQVTIDS
AHAIKKHGVGIKCATITPDEARVKEFNLKEMWKSPNGTIRNILGGVIFREPIICKNVPRL
VPGWTQPIVVGRHAFGDQYKATDFKFPGKGKLTIKFVGEDGQVIEKDVFDAPSAGVAMAM
YNLDDSIRDFARASMNYGLMRKWPVYLSTKNTILKAYDGRFKDIFEEVYQAEFKAQFDAA
GITYEHRLIDDMVASALKWSGGYIWACKNYDGDVQSDTVAQGFGSLGLMTSVLLSPDGRT
VEAEAAHGTVTRHYRQHQKGQETSTNSIASIFAWTRGLAHRAKLDDNAELAKFALTLEKV
CVDTVEAGYMTKDLALLIGPDQPWLSTTAFLDKVDENLRAAMAA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatcaaggttgccaacccggtcgtcgatctcgacggcgatgaaatgacccgt
atcatctggcagttcatcaaggaaaagctgatccttccctatctcgatctcgagattgaa
tactacgacctctcggtagaaaaccgcgatgcaaccaatgaccaggtgacgatcgattcc
gcccacgccatcaaaaagcacggcgtcggcatcaaatgcgccaccatcacaccagacgaa
gctcgcgtgaaggaattcaacctgaaggaaatgtggaagagcccgaacggcacgatccgc
aacatcctcggcggcgttattttccgcgagccgatcatctgcaaaaacgttccccgcctc
gtccccggctggacccagccgatcgttgtcggtcgtcacgccttcggcgaccagtataag
gcaaccgatttcaaattccccggcaagggcaagctgaccatcaagttcgtcggcgaagac
ggccaggtcatcgagaaggacgtgttcgacgcaccgtccgcaggtgtggctatggccatg
tacaacctggatgattcgattcgcgacttcgcccgtgcttcgatgaactacggcctgatg
cgcaaatggccggtctatctgtcgaccaagaacaccattttgaaggcctatgacggtcgc
ttcaaggatattttcgaggaagtctaccaggccgaattcaaggcccagttcgacgccgcc
ggcattacctacgagcatcgcctgatcgacgacatggttgcctctgcactgaaatggtcc
ggcggctatatctgggcctgcaagaactatgacggcgacgtacagtcggacacggttgcg
cagggcttcggctcgctcggcctgatgacctcggttctgctgtcgccggatggccgcacg
gtcgaagccgaagccgcgcacggcaccgtgacccgtcactaccgccagcaccagaagggc
caggaaacctcgaccaattccatcgcctcgatctttgcctggacccgtggcctcgcgcac
cgcgccaagctggacgacaatgccgagctggccaagttcgccctcacccttgaaaaggtc
tgcgttgacactgtcgaagctggctacatgaccaaggatctggcgctgctgatcggtccc
gaccagccgtggctgtcgaccactgctttcctcgacaaggtcgatgaaaacctccgggct
gcaatggctgcctga
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