Agrobacterium vitis VAT03-9: RvVAT039_30450
Help
Entry
RvVAT039_30450 CDS
T08809
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine biosynthesis protein TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avv03016
]
RvVAT039_30450 (ttcA)
Transfer RNA biogenesis [BR:
avv03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RvVAT039_30450 (ttcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
BCH65829
LinkDB
All DBs
Position
1:3305064..3305960
Genome browser
AA seq
298 aa
AA seq
DB search
MNLAFARSATERTEADEAEDAEDAQENVRHPLFSAAPQSVSFNKLRKRLLRQVRQAMDDF
GMLNGQKRWLIGLSGGKDSYGLLALLMDLKWRGLLPVELIACNLDQGQPNFPKHVLPDYL
KSIGMPHRIEYRDTYSIVKEKVPAGGTYCSLCSRLRRGNLYRIAREEGCDALVLGHHRED
ILETFFMNFFHGGRLAAMPAKLLNDEGDLFVLRPLAYAAEDDLAKFAAAMQFPIIPCDLC
GSQDGLQRNAMKDMLAGIEAKMPGRKDAMLRALSHVNPSHLLDPALFDFSGLVVTKPS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgcatttgcgagaagcgcgacggaacgcaccgaggccgatgaggccgaagac
gccgaagacgcgcaggagaatgttcgccatcccctgtttagtgccgcaccacaatcggtt
tccttcaacaagctgcgcaagcggttgctgcgccaagtgcgccaggcaatggacgatttc
ggcatgctgaacggccagaagcgctggctgattgggctttccggtggcaaggacagctat
ggtctgctggcgttgctgatggatttgaaatggcgcggcctgctgcccgtcgagctgatc
gcctgcaatctcgatcaggggcaaccgaattttcccaaacatgtcctgccggattacctg
aaatccatcggcatgccgcatcgcatcgaatatcgagatacttattccatcgtcaaggaa
aaggtcccggcgggcggcacctattgttcgctctgctcgcggctgcggcgcggtaatctc
taccgcatcgcccgcgaagaaggctgtgatgcgctggtgctcggccatcaccgcgaagac
attctcgaaaccttcttcatgaattttttccatggtggccggttggcagccatgccagcc
aagttgctaaatgatgagggcgatctcttcgtgctgcggccattggcctatgcggcggaa
gacgacctcgccaaattcgctgccgccatgcagtttccaatcattccctgcgatctctgc
ggctcgcaggacggtttacagcgaaatgccatgaaggacatgctggctggaatcgaagcc
aagatgccaggccgcaaggatgcgatgctgagggcattgtcgcatgtgaacccctcgcat
ctgcttgatccggcactttttgatttttccgggctggttgtcacgaagccgtcataa
DBGET
integrated database retrieval system
