Agrobacterium vitis VAT03-9: RvVAT039_31210
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Entry
RvVAT039_31210 CDS
T08809
Symbol
hemN_2
Name
(GenBank) coproporphyrinogen-III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00860
Porphyrin metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAT039_31210 (hemN_2)
Enzymes [BR:
avv01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
RvVAT039_31210 (hemN_2)
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
BCH65905
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Position
1:3369271..3370623
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AA seq
450 aa
AA seq
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MPAKALLPKYAAAVPRYTSYPTAPHFHTGVDCGNYAQWLSLLGQGQTISLYIHIPYCDRL
CWFCACHTKHTLKYEPITAYLTALFSEVENTGRLVGREAVVTAVHLGGGSPTMLRPQDMV
ALMDRLRANFTFADDAEISVEMDPNDLDEARYDALASIGLTRASLGVQDFDPVVQKAINR
LQTFEQTKSVVEQVRLRGATSVNCDILYGLPYQTLESLEKTVLDIVSLKPDRIALFGYAH
VPWMKKHQTLIPESALPDIVMRYEQMVRASAMLVEAGYDAIGIDHFALPEDSLAAAARQK
RLRRNFQGYTTDGADALIGLGASSISQLPQGYVQNMPATGEYQRLVSENGLAATRGIALT
GDDRVRAAVIEQIMCEFGFSFAEIRQAFPDVAEDVIAEAKIFTASNGDDLCRIDRECFTL
TPTGRLFARSIAATFDCYFSSGKARHSIAV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaaagcgcttcttccgaaatatgccgccgccgttccgcgctacacgagttat
ccgacggcgccgcattttcataccggtgttgactgtggcaattatgcgcagtggctatcg
ctgttggggcaggggcagacgatctcactttatattcatatcccctactgcgacaggctc
tgctggttttgcgcctgccataccaaacatacactaaagtatgagccgataaccgcttat
cttaccgcgcttttcagcgaggtcgaaaataccggcaggctcgtcggtcgcgaagcggtg
gtgacggctgtgcatcttggtggtggctctcccaccatgctgcgtccgcaggacatggtg
gcgctgatggaccggcttcgggcaaattttacctttgccgatgatgcggaaatcagcgtg
gagatggacccgaacgatctcgacgaagctcgatatgatgcgcttgcgtccattggtttg
acgcgagcaagcctcggtgttcaggatttcgacccggtggttcagaaggcgatcaaccgt
ctccaaaccttcgaacagactaaatcagtggttgaacaggtgcgtctgcgcggcgccacc
tcggtcaattgcgatattctctatggtcttccttatcagaccctcgaaagtctggagaaa
actgtcctcgatatcgtatcgttgaagccggatcggattgcgttattcggctatgctcat
gtcccctggatgaaaaagcatcaaacgctgattcccgagagcgccttgcctgatatcgtc
atgcgctatgaacagatggtgcgggcctctgccatgctggtggaggctggctatgatgcc
attggcatcgaccattttgcattgcccgaggatagtctggctgccgcggcacggcagaaa
cggctgcggcgtaattttcagggttatacgactgacggcgccgatgcgttgattggactt
ggcgcctcttcgatcagccaactgccgcaaggctatgtacagaacatgcccgcgactgga
gaatatcagcgtcttgtcagcgaaaacgggcttgccgcgacacgaggcattgctctgacc
ggcgatgaccgagtgcgtgccgccgtcatcgagcagatcatgtgcgagttcggcttttcc
tttgccgagatccgccaggcttttccagatgtcgccgaggatgtgatcgcagaagccaag
atattcacggcttccaacggtgacgatctatgccggatcgaccgggagtgttttactttg
acccccaccgggcggctctttgcccgcagtattgctgccacgttcgattgctacttttcc
agcggcaaggcccgtcattccattgcggtttga
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