Agrobacterium vitis VAT03-9: RvVAT039_31960
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Entry
RvVAT039_31960 CDS
T08809
Symbol
ntrB
Name
(GenBank) two-component sensor histidine kinase
KO
K07708
two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:
2.7.13.3
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_31960 (ntrB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
avv01001
]
RvVAT039_31960 (ntrB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avv02022
]
RvVAT039_31960 (ntrB)
Enzymes [BR:
avv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RvVAT039_31960 (ntrB)
Protein kinases [BR:
avv01001
]
Histidine kinases
NtrC family
RvVAT039_31960 (ntrB)
Two-component system [BR:
avv02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
RvVAT039_31960 (ntrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS
PAS_9
Diguanyl_cycl_sensor
PAS_8
PAS_4
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
BCH65980
LinkDB
All DBs
Position
1:3450009..3451154
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AA seq
381 aa
AA seq
DB search
MSNEPKPGDSNILAMAVLNAIQNPVVMVNGEGHIVFANWEAEAFFGASASHLARHKISTF
IPFGSPLLELIDQVRERRAPVNEYRVDLSSPRLGQDKLVDLYVAPVTVEPGAVVVVFQER
SMADKIDRQLTHRAAARSVTGLASMLAHEIKNPLSGIRGAAQLLESSVPPEDRSLTRLIC
DETDRIVSLVDRMEIFSDERPVDRTSINIHSVLDHVKAIAQAGFARHLKITESYDPSLPP
VFANRDQLVQVFLNLIKNAAEAVGDRADGEIQLTTAYRPGIRLSVAGSREKISLPLEFCV
ADNGPGVPSDLLPHLFDPFITTKTNGSGLGLALVAKIIGGHGGIVECDSQGNRTLFRVLM
PVSKETVDDDAPFAKSVGRSR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgaaccgaaacccggcgatagcaatatactggcgatggctgtgctcaacgcc
atccagaacccggtggtcatggtgaatggcgagggacatatcgtttttgccaattgggag
gcagaggcgtttttcggcgccagcgccagccatctcgcccgccacaagatttccaccttc
attccgttcggcagtccgctgctggaactgatcgatcaggtgcgggagcggcgggcaccc
gtcaatgaataccgtgtcgatctcagttctccccggcttggccaggacaagctggtcgat
ctctacgtcgcaccggtcactgtcgagccgggcgctgtcgtcgtggtgtttcaggaacgc
tcgatggccgacaagatcgaccgtcagctcacccaccgcgctgccgcgcgctccgtcacc
ggccttgcctcgatgcttgcccatgaaatcaagaacccgctgtccggcattcgcggggcg
gcgcaattgctggaaagctccgtacctccagaggatcgcagcctgacccggctgatctgc
gacgagaccgatcggattgtctcgctggtggaccgtatggaaatcttttccgacgagcgg
ccagtggatcgcacctcgatcaatatccattcggtgctggaccatgtgaaggcgattgct
caggcaggctttgcccggcatctgaagatcaccgagagctacgacccctcgctgccgccg
gtgtttgccaaccgggatcaattggtgcaggtgtttttgaacctgatcaagaatgccgcc
gaggcggtgggcgaccgggctgatggcgaaatccagctgaccacggcctatcgccccggc
ataaggctgtcggttgccggatcgcgggaaaagatctcgctgccgctggaattctgcgtt
gccgataatggtccgggcgtgccttccgaccttctgccgcatctgtttgatccgttcatt
accaccaagaccaacggatctggcctgggccttgccctggtggccaagatcatcggcggc
catggcggtattgttgaatgcgacagtcagggcaaccggacgctattccgcgtgttgatg
ccggtttccaaggaaacggttgatgacgacgctccctttgcgaaatccgtgggaagatca
agatga
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