Agrobacterium vitis VAT03-9: RvVAT039_31970
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Entry
RvVAT039_31970 CDS
T08809
Symbol
ntrC
Name
(GenBank) nitrogen regulation protein NR(I)
KO
K07712
two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_31970 (ntrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avv02022
]
RvVAT039_31970 (ntrC)
Two-component system [BR:
avv02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
RvVAT039_31970 (ntrC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_2
AAA_16
AAA
Ig_mannosidase
HTH_30
AAA_22
AAA_3
nSTAND3
AAA_7
FleQ
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
BCH65981
LinkDB
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Position
1:3451151..3452602
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AA seq
483 aa
AA seq
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MTATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWISAGEGDLVVTDVVMPDEN
AFDLLPRIKKARPDLPVLVMSAQNTFMTAIRASEKGAYDYLPKPFDLTELIAIIGRALAE
PKKKPARLGDDMQDGMPLVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVAKALH
DYGKRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIG
DMPMDAQTRLLRVLQQGEYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLN
VVPLRLPPLRDRAEDIADLVRHFIQQGEKEGLDAKRFEQEALEVMKSYAWPGNVRELENL
VRRLMALYPQDVITREIIEQELRSDITDSPLTKGGSGGGHMTIAQAVEENMRSYFASFGD
NLPPPGLYDRVLTEMEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIRELGVSVYRSS
RSA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacagccactattcttgttgccgatgacgatgctgcgatccgcaccgttttgaaccag
gcgttgagccgtgctggttacgatgtgcgcatcacgtcgaatgccgcaaccctgtggcgc
tggatttcagccggtgagggcgatcttgtcgtcaccgacgtggtcatgccggacgaaaac
gccttcgatctcctgccgcgcatcaagaaggcccggcccgacctgcccgttttggtgatg
agcgcccagaacacctttatgacggccatccgcgcttcggaaaagggtgcctatgactac
ctgcccaaacccttcgacctgaccgaactgatcgccattatcggcagggcgctggccgag
ccgaagaaaaagccggcgcggctgggcgatgacatgcaggacggcatgccgctggttggc
cggtccgccgccatgcaggaaatctaccgggttctggcccggctgatgcagaccgatctg
acgctgatgatcactggcgaatccggcacgggcaaggaattggtcgccaaggcgctgcat
gattacggcaaacgccgtaacggtcccttcgtggcgatcaacatggcggccattccgcgc
gacctgattgaatcggaactgttcggccacgaaaagggtgcgtttaccggcgcacagaac
cgctccaccggacgcttcgagcaggccgagggcggtacgctgtttctggacgagattggc
gatatgccaatggatgcccagacccggctcctgcgggttctacagcagggtgaatacacc
acggtcggcgggcgcacgccgatccgcaccgatgtgcgtatcgttgccgccaccaacaag
gacctgaaacagtcgatcaatcagggcctgtttcgcgaagacctttattaccgcctgaac
gtcgtgccgctgcggctgccgccgttgcgcgaccgggcggaggatattgccgatctggtg
cgccatttcatccagcagggcgagaaggaaggtctggatgccaagcgattcgagcaggaa
gcgctcgaagtgatgaaatcctatgcctggccgggcaatgttcgtgagttggagaacctg
gtgcgccggttgatggcgctttatccacaggatgttatcacccgcgaaatcatcgagcag
gaactgcgctccgacattaccgacagcccgctgaccaagggtggttcgggtggtggccat
atgaccattgcacaggcggtcgaggaaaatatgcgcagctactttgcgtccttcggcgat
aacctgccgccgcccggcctttacgaccgggttttgaccgaaatggaatatcctctcatt
ctcgcagccctgacggccacccgtggaaaccagatcaaggccgccgatcttttgggtttg
aaccgaaatacgctgcgcaagaaaatccgcgaattgggtgtttcggtttaccgcagctcg
cgtagcgcttga
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