Agrobacterium vitis VAT03-9: RvVAT039_32110
Help
Entry
RvVAT039_32110 CDS
T08809
Name
(GenBank) hypothetical protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
RvVAT039_32110
Enzymes [BR:
avv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RvVAT039_32110
Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RvVAT039_32110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Barwin
Motif
Other DBs
NCBI-ProteinID:
BCH65995
UniProt:
A0AAN1X2E0
LinkDB
All DBs
Position
1:3467624..3468733
Genome browser
AA seq
369 aa
AA seq
DB search
MAWVVLAGVAVTSCGANHDVSKVSTTKKRSKEYFAESAYGVKASPRVVENGPVPKGGGRR
LVGNPYVVAGKVYKPRENPNYEASGLASWYGSAFHGRYTANGEVYDQYGISAAHPTMPLP
SYARVTNLDTGSSVIVRVNDRGPFHANRLIDLSDKAAELLDVKGHGIANVKVKYVGPADM
TGHDMPYLMASYVRKGQRVPGVDPFGGGQIASGVMVASNAPQQNFFGRFAGPASASAPQP
KTAKPVIASASASAYGSNSYPVSASANAPRPVQRQPVAVSRPEPTRIEPTREWQAPAIAS
AEPMPQPRNAASTGVARREMAPVAAPQPARANATRQKPVAAPSGGGLPPGWHVGPAPVTA
NAYSNPNEG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggttgttctggcgggcgtggcggtgacgtcctgcggcgccaaccatgatgtg
agcaaggtcagcacgaccaagaaacgcagcaaggaatattttgccgaatccgcctatggc
gtgaaggccagcccccgtgtggtggaaaacggccctgtgccgaaaggcggcggtcgccgt
ctggtcgggaacccctacgtggtggcaggcaaggtctataagccacgcgagaaccccaat
tacgaagcatccgggcttgcctcatggtatggctcggctttccatgggcgctacaccgca
aatggcgaagtctatgaccaatacggcatttccgccgcccatccgaccatgccgctcccc
agctacgcccgtgttaccaatctcgataccggcagttcggtcattgttcgcgtcaacgat
cgtggcccgttccacgccaatcgcctgatcgatctctccgacaaggcagccgaacttctt
gacgtcaagggccacggcatagctaatgtgaaggtcaaatatgtcggcccagccgacatg
accggccacgacatgccctatctgatggcgtcttatgtccgcaagggccagcgcgttcct
ggcgtcgatcccttcggtggtggccagatcgccagtggtgtgatggtggcgtcgaatgcg
ccgcagcagaatttcttcggccgtttcgcaggcccggccagcgcgtctgcaccgcagccg
aaaacggcaaaaccggttattgcgtcggcctcagcctcggcttacggcagcaactcctat
ccggtttccgccagtgccaatgcaccgcgcccggtccagcgtcagccggtcgccgtatcg
cggccagaaccgacccgcattgaaccgacccgcgaatggcaggctccggccattgcctcc
gctgagccgatgccgcagccgcgcaatgctgccagcaccggcgtggctcgccgggagatg
gcgcctgtggccgcaccgcagccggctcgggccaatgcgacccgtcagaagccggtggcg
gcaccgtctggtggcggcctgccgcccggctggcatgttggcccggctcctgtgacagcc
aatgcctattccaatcccaatgaaggctga
DBGET
integrated database retrieval system
