Gillisella vitis VAT03-9: RvVAT039_32120
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Entry
RvVAT039_32120 CDS
T08809
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
avv
Gillisella vitis VAT03-9
Pathway
avv00550
Peptidoglycan biosynthesis
avv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RvVAT039_32120
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avv01002
]
RvVAT039_32120
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
RvVAT039_32120
Enzymes [BR:
avv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RvVAT039_32120
Peptidases and inhibitors [BR:
avv01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RvVAT039_32120
Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RvVAT039_32120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
BCH65996
LinkDB
All DBs
Position
1:3468946..3470112
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AA seq
388 aa
AA seq
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MLLAALFYGASVQVSAFAQGAATDVATPAVYATEAKQVLLIEAETGSVLFEKNSDQPFTS
ASLSKMMVAEVVLDALKSGRLTLSKDFPVSEFAWRTGGAPSRTATMFAAVRSRVPVDALL
KGVMVQMANDACLILAEGMAGSEQGFVKLMNERAAALGLKDSHFANATGLPDPGNKVSLR
DMITLAQALKSNYPDFYALYAQPDFEWNKIFQRNRNPLLGQSPGVDGLAAGFAEGEGYSI
VASAQQNGVRLYLGLAGSESDKSRQEDAAKALAWGFSAFEKRRLFEAGQVIGEASVYGGE
PAQVPLVSPQPVDVYLPVGASDKLEAKVIYPWPLRPGVAQGQQVGHLKVMLGDKLLRDMP
LQAGSPSTLGSLVKRTRDALVELLFSWV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcttgcagcacttttctacggagcaagcgttcaggtcagcgcctttgcgcaaggg
gcggcaaccgacgtggcaacgcccgccgtctatgccaccgaggcaaagcaagtcctgctg
atcgaggcggagaccggcagtgtgctgtttgaaaagaacagcgatcagccctttacctcg
gcctctctctccaagatgatggttgcggaagtggtgctcgatgcgctgaaatccggtcgt
ctgacgctgtccaaggactttcccgtttccgaattcgcctggcgcaccggtggcgcgccg
tcgcgcacggcgacgatgtttgctgccgtgcgctcgcgcgtgccggtggatgcgctgctg
aagggtgtcatggtgcagatggccaatgatgcctgtcttatccttgccgaaggcatggct
gggtcggagcagggtttcgtcaagcttatgaatgagcgggcagcggcgcttggtcttaag
gacagccattttgccaatgcaaccggtcttccagatcccggcaataaagtcagcctgagg
gatatgatcacgctggcgcaggcgctgaagtccaattacccggatttctatgcgctctac
gcccagccggatttcgaatggaacaagatcttccaacgcaatcgcaatccgcttctcggc
cagtcacccggtgtggatggccttgcggcagggtttgccgagggggaaggttattccatc
gtcgcctccgcgcagcagaatggcgtgcggctctatctgggcctggcgggcagcgaaagc
gacaaatcccggcaggaggatgctgcaaaggcactcgcctggggcttttccgcttttgag
aagcgccgcctgttcgaagcgggacaagtgatcggtgaggccagcgtttatggcggggaa
ccggcacaggtgccgctggtgtcgccgcagccggttgatgtctatctgccggttggcgcc
agcgataagctggaagccaaggtgatctatccctggccgctgcgccccggcgtggcgcag
ggccagcaggtcgggcatttgaaggtcatgctcggcgacaagctgctgcgtgacatgccg
cttcaggccggatcgccgtcaacgctgggctcgctggtcaaacgcacccgtgacgcattg
gtggaactgctgttttcctgggtttga
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