KEGG   Gillisella vitis VAT03-9: RvVAT039_32720
Entry
RvVAT039_32720    CDS       T08809                                 
Symbol
gyrB_2
Name
(GenBank) DNA topoisomerase 4 subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
avv  Gillisella vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:avv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:avv03032]
    RvVAT039_32720 (gyrB_2)
   03036 Chromosome and associated proteins [BR:avv03036]
    RvVAT039_32720 (gyrB_2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:avv02048]
    RvVAT039_32720 (gyrB_2)
Enzymes [BR:avv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RvVAT039_32720 (gyrB_2)
DNA replication proteins [BR:avv03032]
 Prokaryotic type
  DNA Topoisomerases
   RvVAT039_32720 (gyrB_2)
Chromosome and associated proteins [BR:avv03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RvVAT039_32720 (gyrB_2)
Prokaryotic defense system [BR:avv02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    RvVAT039_32720 (gyrB_2)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: BCH66056
LinkDB
Position
1:complement(3530093..3532207)
AA seq 704 aa
MTDKIMDDNNDLFAALPSTPPKAAKTQKGAADVTAAATAPAQPEAPAKAVAFGASTPSST
GNPDDYGASSIRVLEGLEPVRMRPGMYIGGTDEKALHHLFAEVIDNSMDEAVAGHANFID
VHLDAEGFLTVSDNGRGIPVELHPQVPGKSTLEVIMTKLHAGGKFDGKAYETSGGLHGVG
VSVVNALSDLLEVEVARNRKLYRQRFSRGVPLGGLEELGDVHNRRGTRVRFHPDPQIFGD
HAKFDPGRIFRMARSKAYLFGGVEIRWSCDPAILTTGGDIPDKAVFHFPGGLKDYLAATL
GKEFTVTREIFAGKTEKTGGHGAMEWAITWYGGDPQVHSYCNTIPTPEGGTHEAGLRIAL
TKGLKNYAELTQNKRAQQISTDDVMISAVGMLSVFIREPEFVGQTKDKLATVEAQRLVEN
ALRDPFDHYLADNPNEAAKLLDWVIERAEERLRRRKEKEVNRKTAVRKLRLPGKLADCAQ
NTAEGAELFIVEGDSAGGSAKQARNRSNQAILPLRGKILNVGSASREKLMANQQIADLIQ
ALGCGTRTKYRDEDLRYERIVIMTDADVDGAHIASLLITFFYQEMPELIRGNHLYLAVPP
LYVIRQGAKTVYARDDAHRAELMETTFKGKKVEIGRFKGLGEMMPAQLKETTMDPAKRML
LKVEIDDVDFEGTRDAVDALMGTKPEARFRFIQERAAFAENLDI
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgacagacaagatcatggacgataacaacgaccttttcgccgccctgccgtcaacgccc
cccaaggcggcgaagacgcagaaaggtgctgccgatgtgacggctgctgccactgcacct
gcccaaccggaagccccggccaaggcagtggctttcggcgcatcaacgccctcctccact
ggcaatcccgacgattatggcgcgtcctccatccgtgttctagaagggctggagccggtg
cggatgcgccccggcatgtatatcggcggcacggacgaaaaggccctgcaccatctgttt
gctgaagtcatcgacaattcgatggatgaggcggtggctggccatgccaatttcatcgat
gtccatctggatgccgaaggcttcctgacggtgtccgacaatggtcgcggcattcccgtc
gagctgcatccgcaggtgccgggcaaatccacccttgaagtgatcatgaccaagctgcat
gcgggcggcaaattcgacggcaaggcctatgagacctccggcggcttgcacggggtcggc
gtatccgtcgtcaatgcactgtccgacctgctggaagtggaagtggcgcgtaaccgtaaa
ctctatcgccagcgtttttcgcgcggtgtgccattgggcgggctggaagaattgggcgat
gtccataatcggcgtgggacgcgggtgcgctttcaccccgatccgcaaatcttcggtgat
cacgcgaaattcgatccgggccggattttccgcatggcccgctccaaggcctatctgttc
ggtggcgtggaaatccgttggtcctgcgatccggcgattttgaccaccggcggcgacatt
ccggataaggcggtatttcacttccccggcgggttgaaggattatctggccgcgacactc
ggcaaggaatttaccgtcacccgcgaaatttttgctggcaagaccgaaaagaccggcggc
catggtgcgatggaatgggcgattacgtggtatggtggcgatccgcaggttcattcctat
tgcaacaccatcccgacgcccgaaggcggcacgcatgaggccggtttgcgcattgcactg
accaagggcttgaaaaattatgccgaactgacccagaacaagcgcgcccagcagatcagc
actgatgacgtgatgatctcggcggtcggcatgctgtcggttttcatccgcgagccggaa
ttcgtcggccagaccaaggacaagctggcgacggtagaagcgcagcgtctggtcgaaaac
gctctgcgtgatcctttcgaccactatctggccgacaatccgaatgaagcagccaagctg
ctcgactgggtgatcgagcgggccgaggaacggctgcggcggcgcaaggaaaaggaagtc
aaccgcaagacagcggtgcgcaagctgcgcctgcccggcaagctggcggattgcgcccag
aacaccgccgaaggcgcggaactgttcatcgtcgagggtgattcggctggcggctcggcc
aaacaggcccgcaatcgctcgaaccaggccattctgcccttgcgcggtaagatcctcaat
gtcggcagcgccagccgtgaaaaactgatggccaaccagcagatcgccgacctgatccag
gcgctcggctgtggcacgcggacgaaatatcgtgatgaagacctgcgctatgagcgtatc
gtcatcatgaccgatgccgatgtggacggcgcccatatcgcttcactgctgatcaccttt
ttctatcaggaaatgccggaattgatccggggcaatcatctctatctcgccgtgccaccg
ctctacgtgatccgccagggtgcaaagaccgtctatgcccgcgacgacgcccaccgtgcc
gaactgatggaaaccaccttcaaaggcaagaaagtcgaaatcggccgcttcaaaggtctc
ggcgaaatgatgccggcgcagttgaaggaaaccaccatggacccggccaagcggatgctg
ctgaaagtcgagatcgacgacgtcgatttcgaaggcacccgtgatgccgtggatgcattg
atggggactaagccggaagcccgattccggtttattcaggagcgggccgcctttgcggaa
aacctggatatttga

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