Agrobacterium vitis VAT03-9: RvVAT039_32800
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Entry
RvVAT039_32800 CDS
T08809
Name
(GenBank) hypothetical protein
Organism
avv
Agrobacterium vitis VAT03-9
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
Exonuc_VII_L
DUF4455
Motif
Other DBs
NCBI-ProteinID:
BCH66064
LinkDB
All DBs
Position
1:complement(3540218..3546982)
Genome browser
AA seq
2254 aa
AA seq
DB search
MATKKTSESIDDSAFQALEAALRIDFEEEDDTPVRGPAPVAAEAKVSDTPRQTRPAPRTS
APQADTTANEKERLRAAAQAKAAKAPKPASATTADPAPKSPSLAPANDASRRSSSAVLKS
LDAGSMGGALRNATIVSILWGAGGLALSQLLYGSQIWSGGAAAIFANPGIIAILVGTVLP
IFVFFSFAIMMSRAQDMRNAARSMAEVALRLSEPETVASERIMSVGQAVRREVSAMNEGI
ERTIARATELETLVHSEVTALERSYTDNELRVRSLVQELSAERDAIVNHADRIRSSIVGA
HDQLKEDLSLATEEIGIRLATSGEAFASMIDMRAATIMEKSNTAATTLGSLLTAKTDEMV
QTLGAAGFSLSSEFDNRLQALTGSMSTHGEEILRQFETRASTLDANTEKLNAALNDRARQ
LNETLVARTREIAQSFTQGEASITGSLDSALTRLNTSLEEKSVSFRQSLQTNAEDALVDI
DIRSGLFEDRMQATIGQINATFDDRMTEFATAFDQRAGTLDSKLNESLLRINETMAGGSE
TIDGILTTSIDRLGNTMTDQSFALAATLGGNQEALTEALSSHSRELADALERRRRELDET
ISNAQSRIDQIMAERGTALTEALNTSQTRFDETLGSRSEAVINQLTGSHDRISDLLQNAS
SGIVEAVTSSETRLANTLDRKAQTIIEAADGADARIEAALSDKADAIRAAYETNHERLTS
VLDAKVEQLEQTALAVDSRVEAAFGNKADAIRAAYEESEARLTRTLDGKVDQITDAATEA
DMRIELALGNRMDTIRAVYEDSESRLASTIDAKLGALTETLGNADNRIEQAFGTKADQVL
SAYEQSEARLARTLDSKIEQISDAASDADMRIELALGNRMDTIRAVYEDSESRLSSTIDA
KLGALTETLGNADSRIEQAFGTKADQVISAYEQSEARLARTLDSKIEQISDAASDADMRI
ELALGNRMDTIRAVYEESETRLSGTIDAKLGALTETLGTADSRIEQAFGSKADQLRAVYE
EGQARLTQTLDSKVDQLSDVAAEADMRIEFALGSKVDSIRSVYEDSEARLAGTIDAKLGQ
LIETVGFADSRVQQALGSKADQIREAYEANHGRLAEMLDSRINQVMDTATEADLRMALAF
GNKADDIRAAYEENQGRLEQSLEAHSSRLTETLGQSTDRVEQVFGRSTDRVEQVLGSGVS
RIESDITGSVSRLETTFEDNHNRLRHTLDERGNAITNALQNARSGLEETLNEQGMAIGAS
IAASAGMLEMSLEEQQDNLRATIDASSRDLQDRLRGSAGAIAGEFGQAAREISRTAEEFS
TRVEGSLDGVANRLSETGTRIETSLGSLEQRIQGSLEGVDLKVSNAGDNVAAKLSEKVSD
LERVTTDATQRIEQTLGDATQRVADTFDSRTSVIDERLSTMDRALNIGLQNVNNTIEGKA
AGLASSLREAVIGATREIDSEAQKSAELLGRTGQEFSETMNARNEEFTRSVREQAEDLTR
RISDTQNRLAGQGAQIAQSFSDAGDAIVSKVSAAEATITAKAGAIAGTLTDAEKALEERA
TAIRAALSATTGDMTDALDSVDKALDARGNAIRTTLDERTRELNSMLSGRTSELARLIEE
KAKPTVEQYAQVGRDAVERIAQAADQSAHSLRQENAKLADALAARAAEAARQMNAAENSL
TSSAGEMIDRISETNQTLHAVVEQAAQSMANADRQFGATTDRLAATTHKAADVLATSGRL
LESNLERLSNVSNQALSQVTGIVGRFGDHAKVLGQASELLGAAQSNLAGTLEERQQALRD
LSIGIVKRSEEIENTMKSLAGMVDGAFSQAEQRSSQVAGNLRQGIETSFADIGQILGETE
QKAKSAAGSMRDSLLSAGEDATRAIERTLGDAEKRSSELANRLRGGLSSSLADVDRILAE
AGQKSDGTANQMREAVRSAVEDALGRFSGATDEIRRSAQEIRQELDLTRTELKRGAFDLP
EEAKESAGAMRRAVAEQIKALQDISQLVGRSAQQLEISTPAPRAAAPAPAVVQPQPVRPA
PTVQAQAPAPQPAPAPVPARPAISAAPAPQQTPRPAVSPLGLRGSLQSEQPASAAGEGSG
GWISDLLRGASREEQTISSPARATRPAGEAPRSNDSRNPRHMVESLNSLSVDIARAIDHD
ASVDLWRRYQRGERDVFTRRLYTLKGQQTFDEIKRKYDREPEFRTAVDRYIADFEKLLSD
VARTDRDESITQSYLTSDTGKVYTMLAHAAGRFS
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaaaagacaagcgagtcgattgacgatagcgctttccaggccctcgaggca
gccctgaggatcgacttcgaggaagaagacgatacgccagtgcgtggccccgcgcctgta
gcggcggaggcaaaagtgtccgacacaccgagacagactaggcctgcaccacggacctcc
gcgccgcaagcggatacgacagccaatgaaaaagagcggctgcgggccgcggcccaggca
aaagctgccaaggctccaaagcctgcttccgctacgaccgccgatcctgcgcctaagtcc
ccttcccttgcccctgccaacgatgcgtcccgccgcagctcatccgccgtgttgaaatcg
cttgatgccggatcgatgggcggcgcgttgcgcaatgccaccatcgtttcgattctctgg
ggcgccggtggcctggctctgtcgcaattgctctatggctcccagatctggagcggcggc
gctgccgccattttcgccaatccgggcattatcgctattctcgttggcactgtcctgcca
atcttcgtgttcttttccttcgccatcatgatgtcgcgggcgcaggacatgcgcaatgcc
gcccgctccatggcagaagtcgccttgcggctgtccgagccggaaaccgtcgcctccgag
cgtatcatgtcggtcggtcaggccgtgcgtcgcgaagtctcggcgatgaacgagggcatt
gagcgcaccatcgcccgtgccaccgagctggaaaccctggtgcattccgaggtgaccgcg
ctggagcgcagctataccgataacgagcttcgggttcgcagcctggttcaggaattgtcc
gcagaacgtgacgccatcgtcaaccacgccgaccgcatccgctcctccatcgttggcgcc
catgaccagttgaaggaagatctgtcgctggcgacagaggaaataggcatccgactggcg
acatcaggcgaggcattcgcctcgatgatcgatatgcgcgccgcaacgatcatggagaaa
tccaacaccgccgccacgacgcttggatcgctgctgaccgccaagaccgacgaaatggtc
cagactctgggcgccgccggcttctcgctgtcgagcgaatttgataaccgtttgcaggcc
ctcaccggctccatgtcgacccatggcgaagaaatcctgcgccagtttgaaacccgcgcc
tcgacgcttgacgccaacaccgaaaagctcaatgcggcactgaacgatcgcgctcgtcag
ttgaacgaaacgctggtcgctcgcacccgtgaaatcgcccagagcttcacccagggcgaa
gcgtcgatcactggtagcctggacagtgcgctgacacgcctcaacacctctctcgaagag
aaatcggtttccttccgccagagcctgcaaaccaatgccgaagacgcgcttgttgatatc
gacatccgctccggcctgtttgaagaccggatgcaggcgaccattggtcagatcaacgcg
acgttcgacgaccggatgaccgaattcgccactgctttcgatcagcgtgccggcacgctg
gacagcaagctgaacgaaagcctgctgcgcatcaacgaaaccatggcgggcggatcggaa
acgattgatggcatcctgaccacctcgatcgaccgcctcggcaatacgatgaccgatcag
tctttcgcactggccgcaacccttggcggcaaccaggaagcgttgaccgaagccctttcc
agccattcacgggaactggcggacgccctggagcggcgccgccgcgaactggacgaaaca
atttccaacgcacagagccgcatcgaccagatcatggccgaacgtggcacagccttgacc
gaagccctcaacaccagccagacccgttttgacgaaacgctgggcagccgctctgaagcg
gtgatcaaccagctcactggcagccatgatcgcatttccgacctactgcaaaatgcctct
tccggcattgtagaagctgtcacctcctccgaaacccgtcttgctaacacgctggaccgc
aaggcacagacgatcattgaggccgccgatggtgccgacgcccgtattgaggcggccctc
agcgacaaggccgatgcgatccgcgccgcctatgaaacaaaccatgagcggctgacatca
gttctcgatgccaaggtcgagcaactcgaacagacggccttggccgtcgatagccgtgtc
gaggctgctttcggcaacaaggcagatgcgatccgtgcggcctatgaagaaagcgaagcg
cgccttacccgtacgctcgacggcaaggttgaccagatcaccgatgcagcgaccgaggcc
gatatgcgcatcgaacttgcgctcggcaaccgcatggacacgatccgcgccgtctatgaa
gacagcgaaagccgtttggccagcacaatcgatgcaaaacttggcgctctgaccgagaca
ctcgggaatgccgataaccgcattgaacaggcgtttggcaccaaggccgatcaggttctc
tccgcctatgagcaaagcgaagcgcgccttgcccgcacgctcgacagcaagatcgaacag
atcagcgacgcagcctccgacgccgacatgcgcatcgaactggcgctcggcaaccgtatg
gacacgatccgcgccgtctacgaagacagcgaaagccgcctttccagcaccattgacgcc
aagctcggcgccctgactgaaacactaggcaatgccgacagccgtattgaacaggcgttc
ggtaccaaggccgatcaggttatctccgcctatgagcaaagcgaagcgcgccttgcccgc
acactcgacagcaagatcgagcaaatcagcgacgcagcctctgatgccgacatgcgcatt
gagctggcgctcggcaatcgcatggacacgatccgcgccgtctacgaggagagcgaaaca
cgcctttccggcacaatcgatgcaaagctcggcgctctgaccgagacactcggaactgcc
gatagccgtatcgagcaagccttcggctccaaggccgaccagctccgagccgtctatgaa
gaaggccaggcccgccttacacagacccttgacagcaaagtcgaccaactcagcgatgtg
gcggcagaagccgatatgcgcatcgagtttgcactgggcagcaaggtcgattcgatccgc
tctgtctatgaagatagcgaagcgagactggctggaaccattgacgccaaacttggccag
ttgatcgagaccgtcggttttgccgatagccgtgtccagcaggcacttggatccaaggcc
gaccagatccgtgaagcctatgaggcaaatcacggtcgtctggccgaaatgctcgacagc
cgtatcaatcaggtcatggataccgccacggaagccgatctgcgcatggcgctcgccttc
ggcaacaaggctgatgatatcagggccgcctatgaagaaaaccagggccgtcttgagcag
tcactggaagcccattccagccgtttgacggaaacccttggccaatccacagaccgcgtc
gaacaagtctttggccgctcgaccgaccgggttgagcaggtcttggggtctggcgtctcg
cggatcgagagtgacattaccggcagtgtttcgcggctggaaaccacctttgaagacaat
cacaatcgcctgcgccatacgctggacgagcgtggcaatgctatcaccaatgccttgcag
aatgcccggagcggattggaagaaaccctcaacgaacagggcatggccatcggcgcatcg
attgccgccagcgcaggcatgctggaaatgtccctggaagagcagcaggacaatctgcgc
gccaccatcgacgcttcaagccgtgatcttcaggacaggctgcgcggttcggctggtgcc
atcgctggagaattcggtcaggctgcccgcgaaatcagccgtacggcggaagaattctcc
acacgggtcgaaggctcgctggacggcgtcgccaaccggttgtccgaaaccggcacccgg
atcgagaccagcctcggcagtctcgaacagcgtattcagggcagcctcgaaggcgtcgac
ctcaaggtcagcaatgccggtgacaatgttgccgccaaactctccgaaaaagtctccgat
ctggagcgcgtcaccacggatgcaacccagcgtatcgagcagacactcggcgatgccacg
cagcgtgttgccgacacatttgatagccgcacgtctgttatcgatgagcgcctgtcgacc
atggaccgcgcgctgaatatcggcttgcagaatgtgaacaacaccatcgagggcaaggcc
gcaggtctcgcctcatcgttgcgcgaagccgttatcggtgccacccgtgagatcgacagc
gaggcgcagaagtccgccgaattgctgggccggaccggccaggaattctccgagaccatg
aatgcccgcaatgaggaattcacccgttcggttcgcgaacaggcggaagacctgacacgc
cggatctccgacacccagaaccggcttgccggtcagggcgctcagattgcacagagcttc
tcggatgctggcgatgccatcgtcagcaaggtttcggcagccgaggctaccatcactgcc
aaggcgggagccatcgctggcacgttgaccgacgccgaaaaggccctggaagaacgtgcc
actgcgatccgcgcagcactgtctgcaacaaccggcgacatgacagacgccctcgacagc
gtcgacaaggcgctggatgcccgtggcaatgccatccgcaccacgttggacgagcgcacc
cgcgagctgaattcgatgctctcaggccgcacgtcggaattggctcgcctgatcgaggaa
aaagccaagccgaccgtcgagcaatacgcccaggttggccgcgatgccgtcgaacggatc
gcccaggccgccgaccagagtgcccatagcttgcgccaggaaaatgccaagctggccgat
gctctggcagcccgtgccgccgaagcggctcgccagatgaatgctgcggaaaacagcctg
acatccagcgctggcgagatgattgaccgcatcagcgaaaccaaccagacgctgcacgcc
gtcgtcgaacaggcagcccagtccatggccaatgctgaccgccagtttggcgcaacgacc
gaccgcctggccgcgaccacccacaaggccgccgatgtcttggcgacgtctggccggttg
ctggaaagcaatctggaacggctgtcgaatgtctccaaccaggctctgtctcaggtgacg
ggcattgtcggccggttcggcgatcatgcgaaagtgcttggccaggcatccgaattgctc
ggcgcggcgcagtccaaccttgcaggcacgctcgaggagcgtcagcaggccctgcgcgac
ctttccatcggcatcgtcaagcggtcggaagagatcgagaataccatgaagtcgctggcc
ggcatggtcgatggtgccttcagccaggctgagcagcgctctagccaggtagccggaaac
ctgcgtcaggggattgagacatcctttgcggatatcggccagatcctcggagagaccgaa
caaaaagccaagtccgccgctggctccatgcgtgactcactgctttcggctggcgaagat
gccacccgcgccatcgagcgcaccttgggtgatgcagaaaagcgctccagcgagctggca
aaccgcctgcgcggtggcctctcgtcatcgcttgccgatgtcgaccgtatcctggcagag
gccggccagaaatccgatggcacagccaaccagatgcgcgaagctgtgcggtcggctgtc
gaggatgcccttggccgcttctccggtgccaccgacgagatccgtcgttcggctcaggaa
atccgccaggaactcgacctgacccgcaccgaactgaaacgtggcgccttcgatctgcca
gaagaagccaaggaaagcgccggtgccatgcgtcgtgccgttgccgagcagatcaaggca
ttgcaggatatttcacaattggtgggccgcagcgcccagcagcttgaaatttccacgcct
gcgcctcgcgctgccgcgcctgcccctgctgttgttcagccccaaccggttcgcccagcg
ccgacggttcaggcccaggctccagccccacagcccgcaccagctcctgtccctgcccgt
ccggcaatttcggccgcgccagcccctcagcaaaccccacgccctgccgtcagccctctt
ggcctgcgtggcagcctgcaaagcgaacagccagcatcggctgcgggcgaaggctccggc
ggctggatcagcgacctgttgcgaggcgcttcgcgtgaggaacagacgatcagctcacct
gcccgcgccactcgcccagctggagaagcaccgcgcagcaatgacagccgcaacccgcgc
catatggtcgaatcgctgaattcactttcggtcgatattgctcgggccatcgatcacgat
gcctcggtagacctgtggcgccgctaccagcgcggcgagcgtgacgtctttacccgtcgc
ctctacacgctgaagggccagcagacctttgatgaaatcaagcgtaaatacgaccgcgaa
ccggaattccgcaccgccgtcgaccgttatatcgccgatttcgaaaagctgctgtccgac
gtggcccgtacagaccgcgacgagtcgatcacccagtcctacctgacgtccgacaccgga
aaggtttataccatgctcgctcatgcggcaggtcggtttagctga
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