Gillisella vitis VAT03-9: RvVAT039_32990
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Entry
RvVAT039_32990 CDS
T08809
Symbol
rluC
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
avv
Gillisella vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avv03009
]
RvVAT039_32990 (rluC)
Enzymes [BR:
avv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RvVAT039_32990 (rluC)
Ribosome biogenesis [BR:
avv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RvVAT039_32990 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BCH66083
LinkDB
All DBs
Position
1:3561661..3562653
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AA seq
330 aa
AA seq
DB search
MAGIEHITVGPDEAGMRLDRWFKIHYPGLGFGPLQKLMRSGQVRVDGGRVKTDARVQPGQ
VVRVPPMDVDAKTPKSGPIASHDLKHAGDGELLARMLLHEDEKVFVLNKPAGLAVQGGSG
LNRHIDQMLEAWTSKKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYW
ALVKGVPRKHDDKISTWVVKEQTEDGDRMRIARHGEDGADHAVSYYRVLETAAQSLAWLE
MEPYTGRTHQLRLHALHIGHPIIGDPKYYIDDPNWDFPGGVQKRLHLHARHIDIPHPDGG
RLRITAPLPPHMVQTWNLLGLDMENGGDFA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatagaacatattaccgtcggtccagacgaggcgggcatgcgcctcgaccgc
tggttcaagatccattatccgggcctcggcttcggccccttgcaaaagctgatgcgctcc
ggccaggtccgtgtcgatggcggtcgggtgaaaaccgacgcccgcgtgcagcccggacag
gtcgtgcgtgtgccgccgatggatgtcgatgccaagacgccgaaatccgggccaattgcc
tcccatgatctgaagcacgccggcgatggcgaattgctggcgcgcatgctgctgcatgag
gatgaaaaagtcttcgtgctgaacaagcctgccggtctggccgtgcagggcggctccggc
ctcaatcgccatatcgaccagatgctcgaagcatggaccagcaagaagggcgaaaagccg
cgtctcgtgcatcgcctcgaccgggatacgtcgggtgtgctcgtagtggcccgcacccgt
ggtgccgcgcagaaactgacggcagcgtttcgtgagcgtgataccaagaagacctattgg
gcgctggtcaagggcgtgccgcgcaagcatgacgacaagatctccacctgggtggtcaag
gagcagaccgaagacggcgaccgcatgcgcatcgcccgccacggcgaagacggtgccgat
cacgcggtttcctattaccgcgtgctggaaacagcggcgcaaagcctcgcctggctggaa
atggagccctatacgggccgtacccatcagctgcgcctccacgccctgcatatcggccat
ccgatcatcggtgacccgaaatattatatcgacgatcccaactgggatttccccggtggc
gtccagaagcggctgcatctgcatgcccgccatatcgatattccccatcccgatggcggc
cgcctgcgcatcaccgcgcctttgccgccgcatatggtgcagacctggaaccttctgggc
ctggacatggaaaatggcggtgactttgcatga
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integrated database retrieval system
