Agrobacterium vitis VAT03-9: RvVAT039_33180
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Entry
RvVAT039_33180 CDS
T08809
Symbol
cspA3
Name
(GenBank) cold-shock protein
KO
K03704
cold shock protein
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
RvVAT039_33180 (cspA3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Rho_RNA_bind
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BCH66102
LinkDB
All DBs
Position
1:3582352..3582900
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AA seq
182 aa
AA seq
DB search
MEFSGLSEEPLDLVEITGVVKWFDVAKGFGFIVPDNGMQDVLLHVTCLRRDGYQTILEGT
RIVALIHKRDRGYQAFRVLSMDQSTATHPSQMPPVRTHVQVTPSSGLERVLVKWFNRTKG
FGFLTRGEGTEDIFVHMETLRRFGLTELRPGQTVLVRFGNGDKGLMAAEIHPDNPAPHVM
AH
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtggaattcagcgggctctcggaagagcccctggatcttgtcgagatcaccggtgtggtg
aaatggttcgacgttgccaagggttttggctttatcgtaccggataatggcatgcaggac
gtcttgctgcatgtaacctgcctgcgccgggacggttaccagaccatcctggaaggaacg
cggatcgtcgcgctgatccataagcgcgatcggggttatcaggccttccgtgttctgtcg
atggaccaatcgacggcaacgcatccctcacaaatgccgcctgtgcggacccacgttcag
gtgacgccatcgagtgggttggagcgggttctggtcaaatggttcaatcgcaccaaaggc
ttcggcttcctgacgcggggcgagggcaccgaggacattttcgttcacatggaaacgctg
cgtcgattcggcttgacagaattgcggcccggacagacagtgctggtacgcttcggcaat
ggcgacaaaggcctgatggcggcagaaattcacccggataaccctgcgccgcatgttatg
gcgcattga
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