Agrobacterium vitis VAT03-9: RvVAT039_33510
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Entry
RvVAT039_33510 CDS
T08809
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avv03032
]
RvVAT039_33510 (gyrA)
03400 DNA repair and recombination proteins [BR:
avv03400
]
RvVAT039_33510 (gyrA)
Enzymes [BR:
avv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RvVAT039_33510 (gyrA)
DNA replication proteins [BR:
avv03032
]
Prokaryotic type
DNA Topoisomerases
RvVAT039_33510 (gyrA)
DNA repair and recombination proteins [BR:
avv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RvVAT039_33510 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SPT6_acidic
Motif
Other DBs
NCBI-ProteinID:
BCH66135
LinkDB
All DBs
Position
1:3618749..3621541
Genome browser
AA seq
930 aa
AA seq
DB search
MTEQSTPGGKMPSDIEPISIITEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILFGMS
ELGIDWNKKYVKCARVTGDVMGKFHPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSID
GDPPAAERYTECRLQKAAHSLLDDLDKDTVDFRDNYDGTLSEPVVVPAKFPNLLVNGAGG
IAVGMATNIPPHNLVEVINGCIALIENPAIDLPELMQIIPGPDFPTGALILGRSGIRSAY
ETGRGSVIMRGVARIEPMRGDREQIIITEIPYQVNKSTMIEKMAELVRDKRIEGISDLRD
ESDRQGYRVVIELKRDANADVILNQLYRYTPLQSSFGCNMVALNGGKPEQLTLLDMLRAF
VSFREEVISRRTKYLLRKARDRAHVLVGLAIAVANIDEVIRLIRQAPDPQTAREQLMERR
WPAADVESLIRLIDDPRHRINEDNTYNLSEEQARAILELRLARLTALGRDEIDEELNKIG
AEISDYLDILSSRTRIQTIVVDELVAVRDEFGTPRRSQIMEGGPDMDDEDLIAREDMVVT
VSHLGYIKRVPLVTYRAQRRGGKGRSGMATRDEDFVTRLFVANTHTPVLFFSSRGIVYKE
KVWRLPIGTPQSRGKALINMLPLEPGERITTIMPLPEDEASWDNLDVMFSTTRGTVRRNK
LSDFVQVNRNGKIAMKLEEEGDEILSVETCTIDDDVLLTTALGQAIRFPVDEVRVFAGRN
SIGVRGISLQPNDRIISMTILSHVDAEPWQRAAYLKRSATERRASGVDEDDIALVGEEVG
EIGDLSEERYQELKAREQFVLTISERGIGKRSSSYDFRTSGRGGKGIRATDTSKTLEIGQ
LVAAFPVEDKDQIMLVSDGGQLIRVPVDGIRIASRATKGVTIFNTAKDEKVVSVERINEP
EGEEDGEIGAETSAEEGVATDTATPDESAT
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagcaaagcacacccggcggcaaaatgccgtccgatatcgaacccatttcgatt
ataacggaaatgcagcggtcgtatctcgattacgcgatgagcgttatcgtcagccgcgca
cttcccgatgtccgcgatggtttgaagcccgttcatcgtcgcattctgtttggcatgtcc
gagctgggtatcgactggaacaagaaatatgtgaaatgcgcccgtgtaaccggcgacgtg
atgggtaaattccatccacacggcaactcggcgatttatgacgcgctggcccgtatggcg
caggattggtcgctaaggctgccgctgatcgacggtcagggcaatttcggctccatcgac
ggcgatccgccagcggcggaacgctataccgaatgccgcctgcaaaaagccgcacattcg
ctcctggacgatctcgacaaggacaccgtcgattttcgtgacaactatgatggcacgctg
tctgagcctgtcgtcgtgccagcgaaattccccaacctactcgtcaatggcgctggcggt
atcgcggtcggcatggcgacgaatattccgccgcacaatctggtcgaagtcatcaatggc
tgtatcgcgctaattgaaaacccggctatcgacttgccagaactgatgcagattattccc
ggccctgattttccgaccggcgcgctgattctgggccgtagcggtattcgttcagcctac
gagaccggacgcggttcggtgattatgcgcggcgtggcacggatcgagccgatgcgcggt
gaccgtgagcagatcatcatcaccgagattccctatcaggtgaacaagtcgacgatgatc
gagaaaatggccgaattggtgcgcgacaagcgcatcgagggcatttccgacctgcgcgac
gaatctgaccgtcagggctaccgcgtcgttatcgagttgaagcgcgatgccaatgcggac
gtgattctcaaccagctctaccgctataccccgctgcaaagctcgttcggctgcaacatg
gtggcgctgaatggcggcaagccggaacagttgacgctgctcgacatgctgcgcgctttc
gtcagcttccgcgaagaggttattagccggcgaacgaagtacctgttgcgcaaggcgcgt
gaccgcgcccatgtgctggttggtctcgccattgcggttgccaatatcgacgaagtcatc
cggctgatccgccaggcgccagatccacaaacagcgcgcgagcagttgatggagcggcgc
tggccggcagctgatgtcgaaagtctgatccggctgatcgatgatccgcgtcaccgcatc
aacgaggacaatacctacaacctgtcggaagagcaggcacgtgccattctcgaattgcgt
cttgcccgcctgacggcccttggccgcgatgaaatcgacgaggaattgaacaagatcggg
gcggaaatctccgattatctcgatattctgtcgtctcgcacgcggattcaaaccattgtt
gtcgatgagcttgtcgccgtgcgcgatgaatttggcacgccacgccgcagccagatcatg
gaaggcggtcctgacatggacgatgaggatctcatcgcccgtgaagacatggtggtgacc
gtttcgcatctcggctatatcaagcgtgttccgctggtcacctatcgcgcccagcgtcgc
ggcggcaagggtcgctccggcatggcgacacgggatgaggatttcgttacccggctattt
gttgccaatactcacacaccggttctgttcttctcatcacgcggaatcgtctacaaggag
aaggtctggcgtctgccgatcggcacgccgcagtcgcgtggcaaggcgctgatcaacatg
ctgccgctggagccgggtgaacgtattacgacgatcatgccgctgcctgaggatgaggca
agctgggataatctcgacgtgatgttctcgacgacgcggggcaccgtgcgtcgtaacaag
ttgagtgattttgttcaggtcaaccgcaatggcaaaattgcgatgaagcttgaggaagag
ggcgatgaaatcctctccgtcgaaacctgcacgattgatgacgatgtgcttctgacaacc
gctttgggccaggcgatccgcttccctgtcgatgaagtcagagtgtttgccggtcgcaat
tccatcggcgttcgcggcatttcgttgcagccgaatgaccggatcatctcgatgacaatt
ctcagccatgtcgatgccgaaccatggcagcgtgcggcctatctgaagcgttcggctacc
gagcgccgcgccagtggcgtggatgaggacgacatcgcactggttggcgaagaggtgggt
gaaatcggtgatctttccgaggaacgttatcaggaactgaaggcacgcgaacaattcgtg
ctgacgatctctgaacgcggtattggcaagcgctcatcttcttacgatttccgtacgtcg
ggtcgaggcggcaagggcattcgggccaccgacacgtcgaagacattggaaatcggccag
ttggtcgccgccttcccggtcgaagacaaggaccagatcatgctggtctcagacggtggt
cagttgatccgcgtgccggttgatggcatccgcatcgccagccgcgccaccaagggcgtg
acgatcttcaatactgccaaggatgaaaaggtcgtatcggtcgagcgcatcaacgagccg
gaaggcgaagaggatggcgagatcggcgcagagaccagtgccgaggagggtgtcgccacc
gatacagcgacgccggatgagagcgcgacctaa
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