Agrobacterium vitis VAT03-9: RvVAT039_33850
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Entry
RvVAT039_33850 CDS
T08809
Name
(GenBank) RNA helicase
Organism
avv
Agrobacterium vitis VAT03-9
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
LysC
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BCH66169
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Position
1:complement(3661592..3663166)
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AA seq
524 aa
AA seq
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MTTFADLGLSQKVLSAVTDAGYTVPTPIQAGAIPPALMRRDICGIAQTGTGKTASFVLPM
LTLLEKGRARARMPRTLIMEPTRELAAQVAENFEKYGKNHKLNIALLIGGVSFDEQDRKL
ERGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQ
TLFFSATMPPEIQKLADKFLQNPERIEVAPPSSTAKTVTQRLVACQNKDYEKRSTLRDII
RAQDDLKNAIIFCNRKKDVADLFRSLERHGFSVGALHGDMDQRSRTNMLAGFKDNQITLL
VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGRAFTLVTKSDAKYLDA
IEKLIGEKPEWLDGDVASLPPMAEGDRDERRGRGGKNARDKSGSDRNGSDRGRGRERSRD
SARDGDREHRSSHKPDTTEEQISTEAAVEVVATKVDSVKQERKTDRRPSQGNRDYRNNQA
PNPANDDQRERRRQHYRDHDDGPTPVGFGDDIPAFMLIVASAKA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
ttgaccacattcgctgaccttggcctgagccaaaaagttctttccgctgtaactgatgcc
ggctacaccgtgccgacaccaatccaggctggtgccattccgccggccctgatgcgccgc
gacatttgcggcattgcccagacgggcacaggcaagacggcgtccttcgtactgccgatg
ctgacattgctcgaaaaaggccgcgcacgcgcccgcatgccgcgcacgctgattatggag
ccgacgcgcgaacttgcagcccaggtggccgagaatttcgaaaaatacggcaagaatcac
aagcttaacattgccctgctgatcggcggcgtttcgttcgatgaacaggatcgcaagctg
gaacgtggcgccgatgtgctgatctgcacgcctggccgcctgctggaccattgcgagcgc
ggcaagctgctgatgaccggcgtcgaaattcttgttatcgacgaagccgaccgcatgctg
gacatgggcttcattcccgatatcgagcgcatcgccaagctcattccctttacccgtcag
acgctgttcttctcggctaccatgccgccggaaatccagaagctggccgacaagttcctg
caaaatccggaacggatcgaggtggctccgccatcttccacagctaagaccgtgacgcag
cggctggtggcctgccagaacaaggattatgaaaagcgctccaccctgcgcgacattatc
cgcgcccaggacgatctgaagaacgccatcatcttctgtaacaggaagaaggatgtggcc
gatctgttccgctcgctggaacgtcatggtttttcggtcggcgccctgcatggcgacatg
gaccagcgttcgcgcaccaacatgctggccggtttcaaggacaatcagatcacccttctg
gtcgcttccgacgttgcggctcgtggccttgatattcctgatgtcagccatgtgttcaat
ttcgacgtgccgattcatgcggaagactatgtccaccgcatcggccgtaccggccgtgcc
ggtcgctccggccgtgcgttcacgctggtgaccaagtccgacgcaaaatatctcgacgcg
attgaaaaactgatcggtgaaaagccagaatggctggacggcgacgtcgcctctctgccg
cctatggctgaaggtgatcgtgatgagcgccgtggccgtggcggcaagaatgctcgtgac
aagagcggtagtgacagaaacggtagtgaccggggccgtggccgggagcgctccagagac
agtgcgcgtgacggtgaccgtgaacatcgcagcagtcacaagcctgacacgacagaagag
cagattagcaccgaagcggctgtagaagtcgtcgcaaccaaggtggatagcgtgaagcaa
gagcgcaagacagacagacggccaagccagggcaaccgcgattatcgcaataatcaggcg
cccaacccggccaatgacgaccagcgcgaacgccgccgccagcattaccgcgaccatgat
gacggcccgactcctgttggcttcggcgatgatattcctgctttcatgctgatcgttgcc
agcgccaaagcctga
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