Agrobacterium vitis VAT03-9: RvVAT039_34120
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Entry
RvVAT039_34120 CDS
T08809
Name
(GenBank) histidine kinase
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_34120
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
avv01001
]
RvVAT039_34120
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avv02022
]
RvVAT039_34120
Enzymes [BR:
avv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RvVAT039_34120
Protein kinases [BR:
avv01001
]
Histidine kinases
Cell cycle family [OT]
RvVAT039_34120
Two-component system [BR:
avv02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
RvVAT039_34120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
PAS_8
PAS
PAS_4
PAS_9
HisKA
HPTransfase
Claudin_2
DUF3240
Motif
Other DBs
NCBI-ProteinID:
BCH66196
UniProt:
A0AAN1X3K5
LinkDB
All DBs
Position
1:complement(3686909..3689671)
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AA seq
920 aa
AA seq
DB search
MLLTVIPGNGDGTGRARPAIVAAMLPDDKVPGDKALDNKANERRDEDRMTNQQQTDESVG
PLVDRRPSSGAAFRIVILAFVLLAAAAAFVVFKNSLDNQIVLGVLGVLAIVGIFFLVSAI
IGFIEVMPQTPSDGLGRAFLDSQSEGTLVTDPRGHIIYANAAYGRMTGVRRATDVQTLEA
LLSRHREAGEALYRLINGLREDRDGQEEFRLLKPLGPFSDNGSGAHWYRLRARRLVEKGP
HKGLQIWQIADITADRDDQERFFKELQNAIDYLDHAPAGFFSAGRKGEIFYLNATLSEWL
GIDLTQFSPGAIYLKDLVAGEGMALIQSVQAEPGLSKTATLDLDLRRADGRSFPARLVHR
VRSARDGAPGESRTIVLARQEVIAGDRSDSSASMRFTRFFNNTPMAIASVDGQGRILRTN
APFLKFFSDVVSRDDIDRKIRLDAVLHDNERPVFAEALSQARDRQVDIAPIDSRHPLDDM
RHFRFYVNAVIDQSDEAPEEAAIVYAVDVTDQKALETQMAQTQKMNAVGTLAGGIAHDFN
NVLTAILLSSDHLLLQARPSDSSFADLMEIKRNANRAAVLVRQLLAFSRKQTMRPTVLNL
TDVIGDLRMLVDRLISGTNVKLHVDYGRDLWPVKADLSQFEQVLINLCVNARDAMPQGGN
ITISTRNVTGVEAAAYNHRGLPHEDFVLIEVADRGTGIAPEILDKIFEPFFTTKDVGKGT
GLGLAMVYGIVKQSGGYIYLESEVGEGTTFRIFLPRHIVEPVVIDATLAPGAQAQQGNGR
VLAASESENSKEPDDLTGKSAVVLLVEDEDAVRRGGKRMLETRGYTVHEACSGVEALEIM
EELEGKVDIVVSDVVMPEMDGPSLLKELRKTYPDMKFIFVSGYAEDAFARNLPADAKFGF
LPKPFSLKQLAIAVREMLDA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaaccgtgattcccggcaatggcgacgggacaggccgtgcgagaccagctatc
gtggcggcaatgctgccggatgataaggtgccgggtgacaaggcgctggataacaaggca
aatgaacgccgagatgaggaccgaatgacaaaccagcagcagacagacgaaagcgtaggc
ccgctggtggatcgcaggccgagtagcggggccgcgtttcgcatcgtcatcctggccttt
gttcttctggctgccgccgccgccttcgtggtcttcaaaaactcgcttgacaaccagatc
gtgctgggggtgctcggcgtcctggccattgttggcattttctttctggtctcggcgatt
atcggatttatcgaagtcatgccgcagactccgtccgacggtcttggccgcgccttcctc
gacagccagagtgagggaacgctggtcaccgatccgcgtgggcacattatctatgccaat
gccgcctatggccggatgaccggcgtacgcagggcaacagacgtacagacgctggaagcg
ctgttgtctcgccatcgcgaggctggtgaagcactttaccggctgatcaacggcttgcgc
gaggaccgggacgggcaggaggaatttcggctgctgaagccgctcggaccgttttcagac
aatggttccggcgcgcattggtaccggttgcgggctcgtcgtctggtggaaaaggggccg
cataaaggccttcagatttggcagattgccgatatcaccgccgaccgtgacgaccaggag
cggtttttcaaggaattgcagaacgctatcgattacctcgatcatgcgccagctggcttc
ttttcggctggccgaaagggcgagatcttctatctcaatgccaccctgtcggaatggctc
ggcatcgatctcacgcaattttcgccaggcgccatctacctcaaagacctggttgcgggc
gagggcatggcgctgatccagtcggtacaggccgaaccaggcctgtcgaagaccgcgact
ctcgatctcgacctgcgccgggctgatggccgcagttttcccgcccgccttgtccatagg
gttcgttcggcccgcgatggcgcgccgggggagagccggacgatcgtgctggcccgtcag
gaggtcattgctggtgaccgttcggattcctcagcctccatgcgctttacccggtttttc
aacaatacgccgatggcgattgcctcggtggacgggcaggggcgcatcctgcgcaccaat
gcgcctttcctgaaattcttttccgatgtcgtttcccgggacgatatcgaccgcaagatc
cggctggatgccgtcctgcacgataacgagcgtccggtattcgccgaggcgctgtcgcag
gcgcgcgaccggcaggtggacattgcaccaattgattcgcgccatccgctggatgacatg
cgtcatttccggttctacgtgaacgcggtcatcgaccagagtgacgaggcgccggaagag
gcggccatcgtttacgcggttgacgtcacggaccagaaggcgctggaaacccagatggcc
cagacgcagaagatgaatgctgtcggcacgctggccgggggcatcgcccatgacttcaac
aatgttctgaccgccattcttttgtcttccgaccatctgcttctccaggcgcgaccttcg
gattcgagttttgccgatctgatggaaatcaagcgcaatgccaatcgcgccgccgttctg
gtccggcagttgctggccttttcgcgcaaacagacaatgcgcccgacggtgctgaacctg
accgatgtgatcggcgacctgcgcatgctggtcgaccggctgatctcaggcaccaatgtc
aagctgcatgtggattacggacgggatctttggccggtcaaggcggatctttctcaattc
gaacaagtgctgatcaatctctgcgtcaatgcccgcgatgccatgccgcaaggcggcaat
atcaccatcagcacccgcaatgtcaccggagtcgaagcggccgcctataatcaccgcggc
ctgccgcatgaggatttcgtgctgatcgaagtggccgacaggggcaccggcatcgcgcct
gagatcctcgacaagatcttcgagcccttctttaccaccaaggatgtcggcaaggggact
ggcctgggacttgcgatggtctatggcatcgtcaagcagtccggcggctatatctatctg
gaatcggaagttggcgaaggcacgacattccggattttcctgccgcgccatattgtcgag
ccagtggtgatcgatgcgacccttgcacctggtgcgcaagcccagcagggcaatggccgg
gttctggctgcgtctgaatccgagaattcgaaggagccagacgacctgacaggcaaatcc
gccgtggttctgctggtggaggacgaggacgccgtgcggcgcggcggcaagcgcatgctg
gaaaccaggggctatacggtccacgaggcctgttccggcgtcgaggcgctagaaatcatg
gaggaactggaaggcaaggtcgatattgtcgtttccgacgtggtgatgccggaaatggat
ggcccgtcgctgttgaaggaattgcgcaagacctatccggatatgaaattcatcttcgtt
tctggctatgccgaggatgcatttgcgcgaaacctgcctgcggatgccaagttcggattc
ctgccgaagcccttctccctcaagcaattggccatcgccgttcgcgaaatgctggatgcc
tga
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