Agrobacterium vitis VAT03-9: RvVAT039_35140
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Entry
RvVAT039_35140 CDS
T08809
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_35140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_35140
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RvVAT039_35140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
A2M_recep
Motif
Other DBs
NCBI-ProteinID:
BCH66298
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Position
2:81816..83369
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AA seq
517 aa
AA seq
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MGNVMKSKLGLLATLAFALLPGLALLPGHGLAQDKGGVINVATIGEPPTLDPMASTADLV
GMTTQHIFETLFTFDDKWNVIPLLAEAMPTITDEGKTYDITLRSGVKFHDGSVMTSADVV
ASIERWLATASRGKQVVAYIDKVTAQGDNAIRITLKKPYAPLLSLLAFNNSAAVIIPKST
IADPLTKFIGTGPYMLKERKPDQYIQLVRFDGYKPRTDAANGFGGARKAILDEIRFIPVP
DANTRLEGAVSGQFDYTDSLAPESYDRLKGSKASDPVVLKPYGAPVFVMNTKQGIMTSKT
LRHAVQVALNPQDMLLAAFGNPEFFAVDGAIYPEGYAWHTKEGIARYGSGDPEAAAKLMK
EAGYDGKPVRILTSRQYEFHYKMAQVAAEYLKAAGFKVDLQIYDWATLTTRRADPALWDI
FITHGPFPPEPVLNGWMSDSYPGWWSTPEKTKAIEPFIAESDPVKRQKLFTEIQKTFYED
APVFKVGDFNALSAKAKTLEGFHPSPWPYFWNVSSKK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgtcatgaaatctaaattgggattgctggcaacgctggcatttgcactttta
ccagggctcgcacttctgcctgggcatggtctcgcgcaggacaagggcggggtcatcaac
gtcgcaaccatcggtgagccgccaacactggacccgatggcgtcaactgctgatctggtc
ggtatgaccacacagcatattttcgagaccttgtttacgttcgacgacaaatggaatgtc
attccgctgttggctgaggccatgcccacgattaccgatgagggcaaaacctatgacatc
accttgcgctcgggcgtgaaatttcatgatggctcggtgatgacatccgctgacgtggtg
gcctcgatcgagcgctggcttgcaaccgcatcacgcggtaagcaggttgtggcctatatc
gacaaggtaacagcgcagggcgacaatgccattcgcatcacgctgaaaaagccctatgcg
ccgctgttgtcgctgctggctttcaacaattccgcagcggtgatcattccaaaatccacc
atcgccgatcctttgacaaaattcatcggcaccggcccctatatgctgaaagaacgcaag
ccagaccaatatatccaactggtgcggtttgatggttataaacccagaaccgatgccgca
aacggctttgggggtgcgcgcaaagccattctggatgaaatccgcttcattcccgtgccg
gatgccaacacaaggcttgagggtgcagtctccgggcaatttgactacacagattcactg
gcacccgagagctatgatcgcctgaaaggttcgaaagcctctgatcccgtggtgctcaag
ccctatggtgcgcctgtgtttgtaatgaacaccaagcagggcatcatgaccagcaagacc
ctgcgccatgccgtgcaggtggcattgaacccgcaagacatgttgctggccgcttttggc
aatccggaattctttgccgttgatggcgcgatctatcctgaaggctatgcctggcacacc
aaggaaggcattgcccgctatggcagtggtgaccctgaagccgccgccaagttgatgaaa
gaggcgggctatgatggcaagccagtgcgcattctcaccagccgccaatatgagtttcac
tataaaatggcgcaggtggcagcggaatatctgaaagcggcaggcttcaaggttgatctg
caaatctatgattgggcaaccctgacaacgcgccgtgctgatcctgccctttgggatatt
ttcatcacccacggccccttcccaccagagcctgtgctgaacggatggatgtcggatagt
tatcccggctggtggtcaacgccagaaaagaccaaggcaattgagccattcattgccgag
tctgatcctgtcaagcgccagaagcttttcacggagattcaaaagaccttctatgaggat
gcgccggtgttcaaggtgggtgatttcaatgcgctttcggccaaggccaaaacgcttgag
ggctttcatccatcgccatggccttacttctggaatgtcagttccaagaaataa
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