Agrobacterium vitis VAT03-9: RvVAT039_35530
Help
Entry
RvVAT039_35530 CDS
T08809
Symbol
rbsB
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
avv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_35530 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAT039_35530 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_35530 (rbsB)
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAT039_35530 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
WHD_GTF3C1
Toprim
Motif
Other DBs
NCBI-ProteinID:
BCH66337
LinkDB
All DBs
Position
2:complement(125047..125988)
Genome browser
AA seq
313 aa
AA seq
DB search
MRKLALALAASVFTLSGAFTASAGEIAVIVKTVNSTFWQNVQKGADTAIGKQKAHTMTFQ
GPAAESAIADQVNMVENAVNRKVDAILLAPSDPDALVPAVKKAWEARIPVVIIDSMLSKD
AEKYYQAFLATDNKAAGELAAKAMIQKVGTEGKIAVMSYVAGAGSEIGRVGGFTDYIKAN
SKLQIVGPYYSQSQMATALNQTTDVVAANADLKGIFGANEPTAIGMGRAIKQAGKAGKLV
AIGFDGNQDLQEFVKDGTLEATVVQGSYQMGEKGVDTLLKLLSKEKVEKFIDTGVVVVTK
QNIDKPEAKNVLY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaactagccctggcccttgcggcgtcagtctttacactgtcgggggcgttcacc
gcttcggcgggcgaaatcgccgtgatcgtcaagaccgtcaactccaccttctggcagaac
gtccagaagggcgcggacaccgcgattggcaagcagaaggcgcatacgatgaccttccag
ggtccggctgcggaatccgccattgccgatcaggtcaatatggtcgaaaacgccgtaaac
cggaaggtcgatgccatcctgcttgcgccatccgacccggacgcactggtcccggcggtg
aaaaaggcctgggaagcccgcattcccgtcgtcatcattgactcgatgctctcgaaggat
gccgagaaatattaccaggccttcctggcgacggacaacaaggccgccggcgaactggcg
gccaaggcgatgatccagaaagtcggaaccgaaggcaagatcgccgtgatgtcctatgtg
gcaggtgccggttccgaaatcggccgcgttggcggctttaccgactatatcaaggcaaat
tcgaaactccagatcgtcggtccctactattcgcagtcgcagatggcgaccgcgctgaac
cagacgaccgacgttgttgccgccaatgccgacctgaagggcatattcggcgccaatgag
ccgaccgccatcggcatgggccgggcgatcaagcaggctggcaaggctggcaagctcgtc
gccatcggctttgacggcaaccaggaccttcaggaattcgtcaaggatggcacactggaa
gccaccgtcgtccagggttcctatcagatgggtgaaaagggcgtggatacgcttttgaag
cttctctcgaaggaaaaggtcgaaaagttcatcgataccggcgtcgtggtcgtcaccaag
caaaacatcgacaagccggaagccaagaacgttctttattga
DBGET
integrated database retrieval system
