Agrobacterium vitis VAT03-9: RvVAT039_36350
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Entry
RvVAT039_36350 CDS
T08809
Name
(GenBank) transcriptional regulator
Organism
avv
Agrobacterium vitis VAT03-9
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Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
HTH_8
SurA_N
HTH_AsnC-type
HTH_23
HTH_28
HTH_Tnp_1
HTH_30
MerR
HTH_50
HTH_29
ANT
Phage_CP76
RWP-RK
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
BCH66419
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Position
2:231800..232831
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AA seq
343 aa
AA seq
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MKTVDARYVTANIPAFLIRSLVMTLTDFGLDASRLTAGLGIPMEDLADPACRVSFRQGRE
AILRAMKMTKGKALGLETGIREKITSVGLVGYVMVTAATVGDAVKLGLDLQKDTGSMLEF
DTRESPEGVVVTAASRFHDPDIYVFLVEEAFASFMGVAHGLVGEGFKPVRVDFAYPAPAH
TEAYQRVFGCPVRFGQMENAFIYDAAWYKQPLLTSDPLSHRQLLEFMAYNRARSREAAEI
IESVERVLRQKLHSRTHISKVARALGMSERTLRRRLAESGVSFQSLLDDLRKNRTLELLG
NRNMSVEQIAFAVGFSDPHNFRRAFRRWTGTTPGALRADLSPI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagtcgatgcgcgttacgtgactgccaatatcccggcgtttctcattcgcagc
ctcgtgatgacgctcacggattttggtctcgacgcctcgcgattaacggctggcctcggc
attcccatggaggatcttgccgacccagcctgtcgggtttcttttcgccagggacgtgag
gcgatcctgcgggccatgaaaatgaccaagggcaaggcgcttggattggagaccgggatt
cgcgaaaagattacctctgtgggcctggtcggttatgtgatggtgacagcagcaaccgtt
ggtgacgcggtaaaacttggccttgatctccaaaaagacaccggcagcatgttggaattc
gacaccagggaaagcccggagggcgtcgtcgtcacggcggcgagccgttttcacgatccc
gatatctatgttttcctggtggaagaggcttttgccagtttcatgggggtcgcgcacggc
cttgtcggggagggcttcaagcctgtccgggtcgattttgcttaccctgcgccagcgcat
acggaagcatatcaacgggttttcggctgtccggtccgatttggccagatggaaaacgcc
ttcatctatgatgccgcctggtacaagcaaccgctgctgacatccgatcctcttagccat
cgccagcttcttgaattcatggcctataaccgcgcccgaagccgcgaggcggctgaaatc
atcgaatccgtcgaaagggtcctgcgacagaagctgcacagccgcacgcatatttccaag
gtggcccgtgcgcttggcatgagcgagcgcaccttgcgtcgcagacttgccgagagcggg
gtttccttccaatcgcttctggatgatcttcgcaagaaccgcacgctcgaactgttgggc
aacaggaacatgtctgtcgagcagatcgcatttgcggtcggattttcggaccctcataat
ttccggcgagctttccgccgttggactggcaccacgcctggcgcgcttcgtgcggatcta
tcgcctatttga
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