Gillisella vitis VAT03-9: RvVAT039_36610
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Entry
RvVAT039_36610 CDS
T08809
Name
(GenBank) hypothetical protein
Organism
avv
Gillisella vitis VAT03-9
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Ortholog
Paralog
GFIT
Motif
Pfam:
He_PIG
fn3
Big_9
Cadherin_4
Ig_SIBA-E_2nd
Cadherin_5
FN3_DSCAM-DSCAML_C
K319L-like_PKD
Cadherin
Motif
Other DBs
NCBI-ProteinID:
BCH66445
LinkDB
All DBs
Position
2:258197..263836
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AA seq
1879 aa
AA seq
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MQFGKSFRVAHVLADTKKLAWTRLKRSAGAAFRAFIGVLTILITGLSFATTANAALSASC
SQVNSDFSSPRYLTNTDNFSPDYQNLTAGEYISWTFSTTGTAAGGTSSAIVIYSDNYNNL
LVNESNLGGNINKSGNFTASASVDNLQIILDVTQDNSASPSNYNTLTFSAACYASAPTSP
GAPTIGTATPGNSQATVSFTAPASDGGAAITSYTVTASPGGATATGSASPITVTGLTNGT
AYTFTVTATNSVGTGTASAATSAVTPTVPTFTFSPASGALTAATVGTAYSETVTASGGTS
PYTYAVSSGTLPAGMSLNTSTGEISGTPTTAGSASFTISATDANSATSSASYSLAVAAGL
PGAPTIGTATAGNSQATVSFTAPVSNGGAAITIYTVTASPGGATATGSASPINVTGLANG
TAYTFTVTATNSVGTGTASAATSSVTPTAPTFTFSPASGALTAATVGTAYSETVTVSGGT
SPYTYAVTSGTLPAGMSLNTSTGAISGTPTTAGSASFTITATDANSATGSANYSLAVAAD
VPGAPTIGTASAGDSQATVSFTAPASDGGASITSYTVTASPGGATGTGSASPITVTGLTN
GTAYTFTVTATNSAGTGTASTASNSVTPGASLQAPIANAVSDTVSANSSNNPITLNMTGG
AASSVAIATPASHGTASASGTSITYTPTAGYSGSDSFTYTATNATGTSSPATVSITVTAP
AFTLSPASGTLTAATVGTAYTETVTASGGTSPYTYAVTSGTLPAGMSLNTSTGAISGTPT
TAANTSFTITATDANSATGSASYSLAVAADVPGAPTIGTASAGDSQATVSFTAPASDGGA
SITSYTVTASPGGATGTGSASPITVTGLTNGTAYTFTVTATNSAGTGSASVASNSVTPSA
VLQAPVANAVSETVAANSSANVIALNMTGGTASSVAVASVASHGTATASGTSITYTPTAG
YSGSDSFTYTATNATGTSSPATVTITVTAPTLVLSPSAGTLAAGTVGAAYSQTVAVSGGA
EPYDYEFLSGSLPAGLSITSSGGASARILSGTPSAAGTSNFTVKVTDAYGATITASYSIT
INAAAPIANALTATVTANSSDNVLAPSITGGAATAVTIASSPSHGAATVSGTNFIYTPTA
GYSGSDSFTYTATNATGTSSPATVIITVTAPAFTLSPASGTLTAATVGTAYSETVTASGG
TSPYTYAVTSGTLPAGMSLNTSTGVISGTPTTAANTSFTITATDANSASGSASYSLAVTE
PSVTLSLSPSSGALTTATVGTAYSQSVTTTSGTAPYTYAGTGLPDGLVLDTSTGTISGTP
TTAGSYAIAVTVTDSASPANHGSGNYTLTVNAAASIAFSPAGGALKEAMAGEAYSQQISA
TGGTGSLIYSLSSGSLPKGMVLNISTGALNGPLDAGTEGDYSFAIQARDSNGTTGTASYT
VKVTTRAVTVADHVVDVPAGATPNNVYLNKDATGGPFTEADIVSVEPPEAGTATLIQGEL
AAVSSASPVGWYLKFTPNPAYSGQARIAYRLASSLGNSNTGTVIYNINYNAEQVATDIDN
LVHSFVQTRQNMISSAIKVPGLMERGRMARATTPVTTRMSPSTQGMTFGFSTSLAQMESA
RDSADGIAGGYSSPFNIWIDGAVLAHNDKDTNGSKWGSFAMINMGADYLLTDKALLGLSF
HYDRMTDPTDEDAMLTGNGWLAGPYTSFEVTKGVFWDASLLYGGSSNTIDTQLWDGNFDT
QRWMLDTSIKGKWSLDEATVVTPKLRAVYFSETVDDYAVKNSSGDTIDLDGFTSEQFRVS
LGAEIARSFTLASGSTMTPKLGITTGFSGLDGSGLFGSVTAGASLQTTEAWAIEGSLLFN
IEGEGEKSVGAKVGLSRKF
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcggtaaatcgtttcgtgtcgcgcatgttcttgcagatacaaagaagttggca
tggacccggctcaagcgatcggctggtgccgcctttcgggctttcattggtgtcctcacc
atcctgattaccggcttgagttttgcgacaacagccaatgccgcactttcagcgtcatgc
agccaagtcaattcagacttcagttcgccacgctatctcaccaacaccgacaacttttcc
cctgattatcaaaatttgaccgctggagagtatatttcctggaccttttccaccactgga
acagcagctggcggcacctcatcagcaattgtgatatacagcgacaactataataatctt
cttgttaatgagagtaatcttggtggaaatattaataaatctggcaattttacagccagc
gcttcggtagataatctacagattatccttgatgtcactcaagataactcggctagccct
tccaattataacacactcacattcagcgctgcctgttacgcaagcgcgccgacgtctccc
ggtgcgccgacaatcggaacggccacacctggcaacagccaggccacggtgtccttcact
gccccggccagcgatggcggtgcggcgatcaccagctataccgtgacggcaagtccgggt
ggcgcgacggcaaccggctcggcaagcccgatcaccgtgacgggcctgaccaatggtacg
gcctatacattcacagtcaccgccaccaacagtgttggaaccgggacggcttcggcagca
acgagcgcggtcacgccgacagtgccaacctttaccttttcccctgcctcaggcgcgttg
actgcggcaactgttggaacagcctatagcgagacggtcactgcttcgggcggaacgtcg
ccctatacctatgctgtttcatcaggaacacttcctgctggcatgagcctaaacacatcg
accggagagatctccggcacgccgacgaccgccggaagcgctagcttcaccatctcagcc
acggatgccaatagcgcgacgagctcggcaagttattccctcgccgtggccgcaggcctt
cctggtgcgccgacgattggaacggctacagctggaaacagccaggccacggtgtccttc
accgctccggtcagcaatggcggtgcggcgatcaccatctataccgtgacggcaagtccg
ggtggtgcgacagcaaccggctcggcaagcccgatcaatgtgacgggtctcgccaacggt
acggcctataccttcacggtcaccgccaccaacagtgttggaaccgggacggcttcggca
gcaacgagctcggtcacgccgacagcgccaacctttaccttttcccctgcctccggcgcg
ttgacagcagcaactgttggtacggcctatagcgagacggtcacggtttcgggcggaacg
tcgccctatacctatgcggttacatcagggacacttcctgctggaatgagcctcaacaca
tcgaccggggcaatttccggcacgccgacgaccgccggaagcgctagctttaccatcacc
gctaccgatgccaatagcgcgacgggatcggcgaactattcgcttgccgtggcagcagac
gttccaggcgcgccgacgattgggacggcatccgccggtgatagccaggcgaccgtttcg
tttaccgccccggccagcgatggtggcgcgtccattacaagctataccgtgacggcaagt
ccgggtggagcgacgggaaccggatcggcaagcccgatcaccgtgactggcctcaccaat
ggcacggcctatacgtttaccgtcaccgcgaccaacagtgctggaaccgggacggcttca
acggcatcgaattcggtcacgccgggagcatcactccaggctcccattgctaacgcggtc
agcgacacggtcagtgcgaactcgtcgaataacccgatcacactgaacatgaccggcggt
gcggcctcgtccgttgccattgccacgcccgcgtcgcatggaacggcctcggcctccggc
acgtcgatcacctatacaccgacggctggctattccggttccgacagttttacctacact
gccaccaatgccacgggaacatcctctccggccacggtgtccataacggtaacggcacca
gctttcaccctgtcaccagcctccggcactttaacagcggccactgttggaacagcctat
actgagacagtcacggcttcgggcggaacatcgccttatacctatgctgttacatcaggg
acgctccctgctggaatgagcctcaacacatcgaccggggcgatttccggcacaccgacg
accgctgccaataccagctttaccatcaccgctaccgatgccaatagcgcgacgggatcg
gcgagctattcgcttgccgtggcagcagacgttcccggcgcgccgacgattgggacggca
tctgccggtgatagccaggcgaccgtttcgtttaccgccccggccagcgatggtggcgcg
tccattacaagctataccgtgacggcaagcccggggggagcgacgggaaccggatcggca
agcccgatcaccgtgactggcctcaccaatggcacggcctatacgtttaccgtgaccgcg
accaacagtgccggaaccggttcggcctcggttgcttcgaactcggtcaccccgtctgcc
gttctccaggccccggttgccaacgccgtctccgaaacagttgcggccaattcgtctgcc
aacgtgatcgctctcaacatgaccggcggcacggcctcttccgttgcggtcgcttcagtg
gcatcgcatggaacggccacagcctccggcacgtcgattacctacacgccgacggctggc
tattccggttccgacagttttacctatactgccaccaatgccaccggaacatcctcgcca
gctaccgtgaccatcacggttacggcgccaaccctggtcctctcgccctcggctggtacc
cttgcagcaggcacggtgggtgctgcctacagccaaaccgtcgcagtatccggtggcgca
gagccgtatgactacgaattcctgtcgggatctttgccagctggcctgtccataacgtca
agcggtggcgcctctgccaggattctttccggtacgccgtcggctgccggaacgagtaac
ttcacggttaaagttaccgatgcatatggtgcaacgatcacggcatcttattccattacc
atcaatgcagcagcgccgatcgccaacgcgctgacggcaacggtgacggcaaactcttcg
gataacgttctggccccctccattaccggcggtgctgcgacggcggtcaccattgcctcc
tcgccaagccatggggcagcaacggtatccggcaccaattttatctatacgccgacggct
ggctattccggctccgacagttttacctacaccgccaccaatgccaccggaacatcctcg
ccagccacggtgatcataacggtgacggccccggccttcaccctgtcaccagcctccggc
actttgacagcagcaactgttggaactgcctatagcgagacggtcaccgcttcgggcgga
acgtcgccctatacctatgctgttacttcagggacgcttcctgctggaatgagcctcaac
acatcgaccggggtgatttccggcacaccaacgaccgctgccaacaccagcttcaccatc
accgccaccgatgccaacagcgcctcgggatcggcaagctattcgcttgccgtcacggag
ccatcggtcacgctgagcctctctccgtcgtcaggggctctcaccacagcaacggtgggc
actgcctatagccagtccgtgacgacaacgagtggtaccgctccttatacctacgctgga
accggcctgccggatggccttgtcctcgatacgagtaccggaaccatcagcggaacgccg
acgacggctggaagctatgctatcgcggtgacggtcaccgatagtgcgtcacctgccaat
catggctcgggcaactatacgctgacggtgaacgccgccgcgtccatcgcgttctcgcca
gctggtggagcgctaaaagaagctatggcgggcgaggcttatagccagcagatatctgca
acagggggaacaggatcgctgatctacagcctttcctctggaagcctaccgaaaggcatg
gtgctgaatatctcgaccggtgcgctcaatggaccgctcgatgcgggtacggaaggcgat
tattcctttgccatccaggcccgtgacagcaatggtacgactggcactgcaagctatacc
gtcaaagtgaccacgcgcgcggtgaccgtggcggatcatgtggtcgacgttcccgcaggc
gccacgccgaataatgtctatctcaacaaagacgctaccggaggtccgtttaccgaggcc
gatattgtctccgtcgagccacccgaggcagggacggcaacccttattcaaggtgagctt
gcagccgtctcgtcagcttctcctgtcggctggtatttgaaattcactccgaatccggcc
tattcgggccaggcccgtatcgcctatcgccttgcaagttcgcttggaaattccaacacg
ggcaccgtcatctacaacatcaactataatgcagagcaagtcgcgacggatatcgacaac
ctcgtacacagctttgttcagacccgtcaaaacatgatctcatccgcgatcaaggtgcct
ggtctgatggaacgaggccggatggccagggcgacgacccctgtgacaaccaggatgtct
ccgtctacgcaaggaatgacgttcggtttttccaccagtcttgcacagatggaatcggcg
cgtgacagtgccgacggcattgctggcggctattcttcaccgttcaatatctggattgat
ggtgccgttctggctcataacgacaaggacaccaatggcagcaagtggggcagctttgcc
atgatcaacatgggggccgactatctgctaaccgacaaggcgctgctgggtctttcgttt
cactacgaccggatgacggacccgacggatgaggacgccatgctgaccggcaatggctgg
ctggctggcccctatacctctttcgaagtcaccaaaggcgtgttctgggatgcgagcctg
ctgtatggtgggtcctcaaacaccatcgatacccagctctgggacggcaatttcgatacc
cagcgctggatgttggatacgtccatcaagggaaaatggtctttggacgaagcgaccgtg
gtgacgccgaagctaagagcggtttatttttccgaaaccgtcgatgattacgccgtgaaa
aacagttcgggcgacacgatcgaccttgatgggtttacctcggagcagttcagggtgagc
ctcggcgctgaaattgcccgttcctttacacttgcaagcggctcaaccatgacgccaaaa
cttggtatcaccaccggcttttctggcctcgacgggtccggtttattcggatcggtcacg
gctggcgcgtcactgcaaaccactgaggcttgggcgattgaaggcagccttctattcaac
atcgaaggcgagggcgaaaaatcggtcggtgcgaaggttggattgtcgcggaaattttga
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