Agrobacterium vitis VAT03-9: RvVAT039_38970
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Entry
RvVAT039_38970 CDS
T08809
Name
(GenBank) hypothetical protein
KO
K20543
cellulose synthase operon protein C
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_38970
Transporters [BR:
avv02000
]
Other transporters
Pores ion channels [TC:
1
]
RvVAT039_38970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
ANAPC3
TPR_16
TPR_1
TPR_9
TPR_19
Motif
Other DBs
NCBI-ProteinID:
BCH66681
LinkDB
All DBs
Position
2:537508..539790
Genome browser
AA seq
760 aa
AA seq
DB search
MRTSLIALIAIAAGAVGAVGVLPGHEDLATVSKNSQASGQDVREGEEAGEQVQAGKSERL
PVPRAMPVQLLAEAGTPDPSAPTRASSPLVPVAGEQSAAPVKPTEGGGSGETSRPSVDAS
RPSVDESALRYFAARGDTVRLQAEISRLRMLYPGWQPPENPMSITTGVDSFVQSLWQTYA
DGRYDEVRKAIAGRQQSEPGWMPPEELLGSLRLAETRQSLVKASDDKRYDSVISLASGAP
ELLTCTEVDVLWRVAEAFARTSKPERARDVYTYVLKTCRTPQLRLASMQKASTLLQPALL
EDLLKLEQPSADGQPEFDGIRDDIARQIVARAGQDAGIAVPGVELERLEKAAEREGKASD
ALLLGWYHYRRNDMATAKEWFERSYAKEPNASAAQGLALTQVALGTPGEAEKTMFRFYGT
DQQARAVYLSAVAALLSQDPPKVIDNGVLSRMAPVVIAARNAAAAEQFGWYARALQQMST
AADWFRLVLSWDATYEPAAYGLALSLDTLGDKTGVAQIKAKWAGQSDRIAAVGEVRSSKD
RLAVKQAVRSADRSAGAEMGSSTSGTVSHTRSRPTMVGLQQETGTRRSGCSSTLPAGQLS
PSEALMRGWCLMDLKRPMEAVDAFDRAFSGGDLPLRQDAAYGKSLALLRLKLTDKAAAAA
ASVPLGKERARELQLAILADRAVGAFQLGRAREALIALDQRARLMPEPQDLLLLRGYAYQ
KLGYVGEARQIFQTLSDVGNTSALKALADIRANDPGEPHG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacatcactcatagcgcttatagcgattgcggccggagccgtgggtgccgtgggc
gttcttccgggccatgaggatctcgcgacggtttcgaaaaattcgcaggcctccggccag
gatgtccgtgagggcgaggaggctggcgagcaggtgcaggctggaaagtccgagcgtctg
cccgtgccccgggccatgcccgtgcaactgctggcagaggcaggcacgcccgacccgtca
gcgcccacccgagccagttcgccgcttgtccctgttgccggagaacagtctgccgcaccg
gtaaagcctaccgagggtggagggtctggagaaaccagccgcccatcggttgatgccagc
cgcccctcggtcgatgaaagtgcattgcgttattttgccgcccgtggtgatacggttcgg
ttgcaggctgagatttctcgcctgcgcatgctttatcccggctggcagccgccggaaaat
ccgatgtccatcacaaccggggtcgatagtttcgtccagtccctctggcagacctatgcc
gacggccgttatgatgaggtgcgcaaagccattgccgggcgccagcagagtgaacccggt
tggatgccaccggaggaattgctgggaagtctgaggcttgccgaaacccgccaaagcctg
gtcaaggcatccgatgacaagcgttatgacagtgttatctcactggcgtcaggggcgccg
gaactgctgacctgtacggaggtcgatgttttatggcgtgttgccgaggctttcgccagg
acgagcaagccggaacgcgcccgcgatgtctatacctatgtgctgaaaacctgccggacc
ccacaattgcggctggcatccatgcagaaggcaagcactctgttgcagcccgctctgctc
gaagatttgttgaagctcgaacagcccagtgctgacggacaaccggaattcgacggcatt
cgtgacgatattgcccgccagatcgtggcgcgcgccggacaggatgccgggattgccgtg
ccgggcgttgagctggagcggttggaaaaggctgccgaacgcgaaggaaaagccagcgat
gccctgctgctcggctggtatcattaccgccgcaacgacatggccaccgcgaaggagtgg
tttgagcgttcctacgcaaaagagccaaatgcctcggcggctcaagggttggccctgacg
caggtggcgcttggcacaccgggcgaagcggaaaagaccatgttccgcttttacggcacc
gatcagcaggcgagggctgtctatctttcggcggttgccgcattgctgtcgcaggacccg
ccaaaggttatcgacaatggcgtgctgtcccgtatggcgcctgtcgttatcgcagcccgc
aatgcggcggcagccgagcagttcggctggtatgcgcgcgcgttgcaacagatgtcgacg
gcggcggactggtttcggctggttttgtcctgggatgccacttacgaacccgcggcctac
gggctggccctgtcccttgacactttgggcgacaagaccggcgtggcgcagatcaaggcc
aaatgggccggccagtccgaccggatcgccgcagtcggtgaagtcaggtcttccaaagac
aggcttgcggtaaaacaagcggtgcggtctgccgaccgatcggctggtgccgagatgggg
agttccacgtctgggactgtcagccatacacgctcaagaccaaccatggttggcttgcag
caagaaaccggaaccaggcggtctggctgctcatcaacccttcccgccgggcaattgtcg
ccgtcagaggctttgatgcgcggctggtgcctgatggatctcaagcgtccgatggaggcg
gtcgacgcgttcgacagggcattcagcggcggcgacctgccgcttcgccaggatgccgcc
tatggcaagagtctggcgctgctgcggttgaagctgaccgataaagccgccgctgccgcc
gcgtccgtaccgcttggcaaggaacgggcgcgtgagctgcaattggcgatcctggctgat
cgcgctgtgggcgccttccagcttggccgagcccgtgaggcgctgattgcgctcgaccag
cgcgcccgactgatgccggaaccgcaggatctgcttttgctgcggggctatgcctatcag
aagctcggttatgtcggcgaggcgcgccagatcttccagacactatcagatgtcggcaat
acatccgctctcaaggccttggccgatatccgcgccaatgatcccggcgaaccgcatggc
tga
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