Agrobacterium vitis VAT03-9: RvVAT039_39190
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Entry
RvVAT039_39190 CDS
T08809
Symbol
glgB1
Name
(GenBank) 1,4-alpha-glucan branching enzyme GlgB 1
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00500
Starch and sucrose metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
Module
avv_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
avv_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RvVAT039_39190 (glgB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avv04147
]
RvVAT039_39190 (glgB1)
Enzymes [BR:
avv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
RvVAT039_39190 (glgB1)
Exosome [BR:
avv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RvVAT039_39190 (glgB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
BCH66703
LinkDB
All DBs
Position
2:complement(572064..574271)
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AA seq
735 aa
AA seq
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MTIATSDLLSGIDAQSVQALIDGRHGDPFSILGPHRTDGETVVRAIFPGALGVEMLDRNS
NAPVGRLNLVHPGGLFAGELRSSSRYRFRIEWQGAVQIAEDPYAFGLLLGDMDLHLIAEA
THYDLARTLGANPREMDGVAGVGFAVWAPTAQRVSVVGDFNSWDGRRNPMRLRQSGGIWE
LFVPGLGPGERYKYELIDAQGNVLPQKADPVAKASEAAPGTASIIASNTPFTWTDQAWMT
RQTADSAAREPISIYEVHLGSWLRISEDGNRWLDWVELSQRLVPYVKSMNFTHIELLPIT
EHPFGGSWGYQPLGLFSPTGRYGTPEDLAYFIDRCHASGVGVLLDWVPAHFPTDVWGLAR
FDGSALYEHEDPREGFHRDWNTLIYNLGRKEVKGFLIASAFEWLEHFHIDGLRVDAVASM
LYRDYSRNDGEWIPNQFGGRENLESVEFFKHLNSVVHSRCPHALMIAEESTAWPGVTKSP
EDGGLGFDFKWNMGWMHDSLSYIEEDPVYRKYHHGTMTFSMVYQYSERFVLPLSHDEVVH
GKGSLLGKMPGDHWQKLANLRAYYGFMWAHPGKKLVFMGCEIGQDIEWNHDQSISWDLMD
RPDHAGVQTLVAKLNGVYQQEKALQFSDLDPSGFEWAIADDAENSVIAMLRYDENRENCI
LAISNFTPILRHDYRVGVPQQGRWIEILNSDSIQFGGSGQGKGDVSAEPHPAHGREFSIN
LALPPLATLYLKWVA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgccacgagcgacttgctatccggcatcgatgcccagtcggttcaagccctg
atcgacggcaggcacggcgatcccttttccattctgggaccgcatcggacagatggagaa
acggtggtccgggcgatttttccgggtgcgctcggcgtggaaatgctcgacagaaacagc
aatgccccggtaggccggctgaacctggtgcatccgggcggcctgtttgcgggagagctt
cgctcttcctcgcgctaccggtttcggatcgaatggcagggcgcagtgcagattgccgaa
gacccctatgccttcggcctgctgctgggcgatatggacctgcatctgatcgccgaggcc
acccattacgatctcgctcgcacgctgggcgccaacccgagagagatggacggggtggca
ggggtaggctttgccgtctgggcgccaactgcacagcgcgtttcggtggtgggtgatttc
aattcctgggatgggcgacgcaacccgatgcgcctgcgccaatccggcggcatctgggaa
ttgttcgttccgggcctcggtcccggcgagcgctacaaatatgaattgatcgacgcgcaa
ggcaatgtgctgccgcaaaaggccgatccggtcgccaaagccagcgaagcggcaccggga
acagcatccatcatcgcttccaacacgccgtttacctggacggaccaggcctggatgacc
cggcagaccgccgattccgccgcgcgtgagccgatctcgatctatgaagtgcatctcggc
tcgtggctgcggatctcggaagatggcaatcgctggctcgactgggtggagctgagccag
cggctggtgccctacgtcaaatccatgaatttcacccatattgaattgctaccgatcacc
gagcatccgtttggcggctcctggggttatcagccgctcggcctgttttcccccaccggg
cgctatggcacgccggaggatttggcctatttcatcgaccgctgccatgccagcggcgtc
ggcgtccttctcgattgggtaccagcccattttccgaccgatgtctggggcctggcgcgc
ttcgatggcagcgcgctttatgagcatgaagatccgcgcgagggctttcatcgggactgg
aacacgctgatctataatctcggtcgcaaggaggtgaagggctttctgatcgccagcgcc
ttcgagtggctggagcatttccatatcgacggcctgcgggttgatgccgtcgcctcgatg
ctctaccgcgactatagccgcaatgacggcgaatggattcccaatcaattcggcggacgg
gaaaacctcgaatccgtcgagttcttcaagcatttgaacagcgtcgttcacagccgttgc
ccgcatgcgttgatgattgccgaagagtcgaccgcctggccgggagtgacaaaatcaccg
gaagacggcggcctgggcttcgatttcaaatggaacatgggctggatgcatgacagcctg
tcctacatcgaagaagatccggtctatcgcaaataccatcacggcacgatgaccttcagc
atggtctatcaatattccgagcgattcgtcctgccgctttcccatgacgaagtcgtgcat
ggcaaaggctcgctgctgggtaaaatgcccggcgaccattggcaaaaacttgccaatctc
agggcctattatggtttcatgtgggcgcatcctggcaagaaactggtgtttatgggctgc
gagatcggccaggacatcgagtggaaccacgatcaatccatctcctgggatttgatggac
cgaccggatcacgccggagttcagacgctggttgccaagctgaatggagtgtatcagcag
gaaaaggccctgcaattcagcgatctcgacccatcaggatttgaatgggcgattgccgac
gatgccgaaaactcggttatcgccatgctgcgctatgacgagaaccgggagaattgtatt
ctggcgatatcgaatttcaccccgatcttgcgccatgactaccgtgtcggcgttccccag
caaggacgatggatcgaaatcctcaacagcgattcaattcagtttggaggatcaggacaa
ggcaagggtgacgtctcagcagagccgcacccggcccatggcagggaattttcgataaac
ctcgccctgccaccactggcgacactctatctgaaatgggtggcctag
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