Agrobacterium vitis VAT03-9: RvVAT039_39610
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Entry
RvVAT039_39610 CDS
T08809
Symbol
afuC
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_39610 (afuC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_39610 (afuC)
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAT039_39610 (afuC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
ABC_ATPase
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_22
SbcC_Walker_B
nSTAND_NTPase5
nSTAND1
AAA
NACHT
CysA_C_terminal
AAA_25
AAA_33
Zeta_toxin
ORC-CDC6-like
AAA_23
OB_MalK
nSTAND3
AAA_5
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BCH66745
LinkDB
All DBs
Position
2:complement(630258..631340)
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AA seq
360 aa
AA seq
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MAQLTLDRVSKQFPGSTAVDAFSLHVEDGELVCLLGPSGSGKSTLLRMIGGFEAPTSGVI
RIDGQDVTRLPPERRPTGMVFQSHALWTHMNVFKNIAFGLKLRGMARSEIADRVEAALAM
VGLKDYGQRQTYQLSGGQQQRVALARSLVLEPKILLLDEPFASLDQHLRERLREEVRDIQ
QRLGITTLFVTHGQDEALALADRIVVMRAGRAEQIAPPDRVYREPETEFVAGFIGQMNFI
PGMMRRGAFTHIDLSLAVDADSNPEDGDAVLAVRPEALHLSPTDRADAAFVCRAIDFGSH
LMVDLQLGDGTRVKAMTDPGTGWQKGDRAELQVRAFRVFRHNKVICVSQTAERLRSFANV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgacccttgaccgcgtttcaaagcaatttccaggctcgaccgccgtcgat
gctttttcgttgcatgtagaggatggcgagctggtttgcctgctcggcccatccggttcg
ggtaaatcgacgctgctgcggatgattggcggtttcgaagcaccaaccagcggcgtgatc
cgcattgatggccaggatgtcacccgtctgccgccggaacggcgaccgaccggcatggtc
tttcaaagccacgcgctctggacccatatgaatgtgttcaagaacatcgccttcggcctg
aagctgcgcggcatggcgagaagcgaaatcgctgaccgggtcgaggcagcgctggccatg
gtcgggttgaaggattacggccagcgccagacctatcaactctccggcggccagcagcag
agagtggcacttgcccgctcgctggtgctggagccgaaaatcctgctgctggatgaaccc
tttgccagcctcgaccagcatttgcgcgaacgcctgcgtgaggaagtgcgcgatatccag
cagcggcttggtattaccaccctgttcgtcacccacggtcaggacgaagccctggcattg
gccgaccgtatcgtcgtgatgcgggctggccgcgccgagcagatcgccccgccggaccgg
gtctaccgcgagccggaaaccgaattcgtcgcaggctttatcggccagatgaatttcatt
cccggcatgatgcgccggggcgcattcacccatattgacctttccttggcggtcgatgcc
gatagcaatccagaggatggcgatgctgtgctggcggttcggcccgaagctctgcatctg
tcgcccaccgaccgggcggacgcggcctttgtctgccgggctatcgatttcggcagccat
ctcatggtcgatcttcaactgggtgatggcacgagggtaaaggccatgaccgatccggga
accggctggcaaaaaggcgaccgcgccgaattgcaggtcagggctttccgggtttttcgc
cacaataaggtgatctgtgtgtcccagaccgccgagcgattaaggagctttgccaatgtc
tga
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