Agrobacterium vitis VAT03-9: RvVAT039_39620
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Entry
RvVAT039_39620 CDS
T08809
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_39620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_39620
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAT039_39620
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BCH66746
LinkDB
All DBs
Position
2:complement(631382..632191)
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AA seq
269 aa
AA seq
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MRVGRIDWTGLAFAGLLTLFIALPLLVVGTWAFTEVWRYPSVIPQQFGLRFWFLTLGRAD
VWEALFLSLRLTATVTLLSAVICLPAAYAFARMKFPGRNLLFLSFLASHAFPKFGLLVAI
AAIFLKLHLISTFWGVALIQLVGTLMLMIWIPVAAFQNVDRRMEEAARDAGARPLRVFWS
ITLPQAAPTIFAALLLTFVSTFYETEGAWLIGAPQVRTMPVLMVSFINNQMVVQYGAVLS
VMLWVPSFLALIFARRAIGTGAFAKGFGA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgggtaggatcgactggacgggccttgctttcgcaggcctgctcaccctgttt
atcgccctgccactgctggtggtcggcacctgggcctttaccgaggtctggcgctatcca
tcggtcatcccgcagcaatttggcctgcgcttctggttcctgacgcttggccgcgccgac
gtctgggaagcgctctttctcagcctgcgcctcaccgctaccgtgacgctactgtcggcg
gtgatctgccttcccgccgcctatgcctttgcccggatgaaatttccgggccgcaatttg
ctgttcctgtcttttcttgcctcgcatgccttccccaaattcggcctgctggtggccatt
gcggcgattttcctgaagctgcatctgatcagcaccttctggggcgtggcactgattcaa
ttggtcggcacgctgatgctgatgatctggataccggttgccgccttccagaatgtagac
cggcgaatggaagaagctgcgcgtgatgcgggcgcccggcccttgcgggttttctggtcg
attacgctgccgcaggcagcgccaacgatctttgccgccttgctcctgaccttcgtcagc
acgttttacgaaacagaaggcgcctggttgattggcgcgccacaggtgcgcaccatgcct
gtcttgatggtgtccttcatcaacaatcagatggtggtgcaatatggcgcggtgctgtcg
gtcatgctgtgggttccctctttcctcgcactgatctttgcccgccgcgccatcggcaca
ggcgcattcgccaagggctttggcgcctga
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