Agrobacterium vitis VAT03-9: RvVAT039_40030
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Entry
RvVAT039_40030 CDS
T08809
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_40030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_40030
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RvVAT039_40030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
AAA_25
AAA
AAA_16
AAA_29
AAA_5
RsgA_GTPase
nSTAND3
NACHT
NB-ARC
Mg_chelatase
ATP-synt_ab
nSTAND1
IstB_IS21
ATPase
CbiA
PRK
Sigma54_activat
RecA_N
DUF87
Motif
Other DBs
NCBI-ProteinID:
BCH66787
LinkDB
All DBs
Position
2:complement(689675..691336)
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AA seq
553 aa
AA seq
DB search
MMANLVEIRDLKVQATTDSGRKVEIIKGISLDIPEGEIVALIGESGSGKTTIALTLMGYT
RPGCRITGGTISVAGKDMAALSERDRASIRGTDVAYVPQSAAAAFNPAIRIMDQVIEVTR
IHDLMSKEEARTRAVALFRALSLPNPETIGTRYPHQVSGGQLQRLSAAMALIGDPKLVIF
DEPTTALDVTTQIEVLRAFKSVMRKDGISGVYVSHDLAVVAQIADRIVVLKGGEVQETGT
TAELLADAQHPYTRELLSAFEPKPRTTPLAEDKSVKPLLEIENLIAGYGDLQADGLPLVQ
AVQSVSLTVRNGRNLGIIGESGCGKSTLARSIAGLLPLAAGHIIFNGRELGRHARDRTRD
QLREMQIVFQSADTALNPAKSIEDILGRPLTFYHGMKGKARDARINQLLDMVHLPQSLRQ
RRPSELSGGQKQRINFARALAAEPKLILCDEITSALDTVVAAAVIELLKELQRELGLSYI
FISHDLSVVEAICDEIVVMYAGKKVEQISPQQLAAPQHPYSKLLFSSVPKLDPTWLDTLQ
QDPELVRIYRINP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaacctcgtggaaatccgcgacctgaaggtccaggccaccaccgattccggc
cgcaaggtcgagattatcaagggcatcagcctggacataccggagggtgaaatcgttgcc
ttgatcggcgagagcggctctggaaaaaccaccatcgccttgacgctgatgggctatacc
cgccccggatgccgtataaccggcggcacgatcagtgtcgcgggcaaggatatggccgca
ctttccgagcgcgatcgcgccagtattcgcggcaccgatgtcgcttatgtgccgcaatca
gcggcggcggctttcaatccggccatccggatcatggatcaggtgatcgaggtcacccgc
attcacgacctgatgtcgaaggaagaagcccgcacccgcgccgtggcgctgtttcgggcg
ctgtcgctgcccaatcccgaaacgattggcacacgctatccgcatcaggtctccggcggc
cagttacaacgcctgtcagcggccatggcgctgataggagacccgaaactggtgattttc
gacgagccgaccacggcgcttgacgtgacgacgcagatcgaagtgctgcgcgccttcaag
tcagtgatgcgcaaggacggcatttccggggtctatgtttcccatgatctggccgtcgtt
gcccagattgccgaccggatcgtcgtgctcaagggtggcgaagtgcaggaaaccggcacc
accgccgagctgctggccgatgcgcaacatccctatacccgtgaacttctgtctgccttt
gaacccaagccccgcacaacaccgcttgccgaagacaagagcgtcaagcctctgctggaa
atcgaaaacctgattgctggctatggtgatctgcaagcggatggtctgcctctcgttcag
gcggtgcagtccgtcagcctgacggtgcgtaatggccgcaacctcggcattatcggcgaa
tccggctgcggtaaatccaccttagcgcgcagcattgccggtctcctgccattggcggca
ggccatatcattttcaatggccgtgaactgggccgccatgcccgcgaccgcacccgcgac
cagctgcgtgaaatgcagatcgtcttccaatccgccgatacagcactaaacccagccaaa
tccatcgaggacatcctcggccgtccgctgactttttaccatggaatgaagggcaaggcg
cgcgatgcccgcatcaaccaattgctcgacatggtgcatctgccgcaatcgcttcgccag
cgccgcccctcggaactatcaggcggccagaaacagcggatcaatttcgcccgggcgctg
gctgcggaaccgaaactgatcctgtgtgacgaaatcacctcggcgctcgacaccgtggtc
gccgccgccgtcatcgagcttttgaaggaattgcagcgcgaactgggcctgtcctacatt
ttcatcagccacgatctttcggtggtggaagcgatctgcgacgagatcgtggtgatgtat
gcggggaaaaaggtcgagcaaatctcgccgcaacagcttgccgccccgcaacatccctat
tcgaaactgctgttttcctcagtgccgaaactcgacccgacctggctcgatacgctgcaa
caggacccggaactggtgaggatctaccgcatcaatccgtga
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