Agrobacterium vitis VAT03-9: RvVAT039_40220
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Entry
RvVAT039_40220 CDS
T08809
Symbol
pccA
Name
(GenBank) acetyl/propionyl-CoA carboxylase subuit alpha
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00280
Valine, leucine and isoleucine degradation
avv00630
Glyoxylate and dicarboxylate metabolism
avv00640
Propanoate metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
Module
avv_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RvVAT039_40220 (pccA)
00640 Propanoate metabolism
RvVAT039_40220 (pccA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RvVAT039_40220 (pccA)
Enzymes [BR:
avv01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
RvVAT039_40220 (pccA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
RimK
ATPgrasp_ST
Biotin_lipoyl_2
ATP-grasp_5
GARS_A
HlyD_3
ATP-grasp_3
DUF2118
HlyD_D23
QRPTase_N
Motif
Other DBs
NCBI-ProteinID:
BCH66806
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All DBs
Position
2:711939..713939
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AA seq
666 aa
AA seq
DB search
MAISKILIANRGEIACRVIKTAKRMGIATVAVYSDADANALHVKLADEAVHIGPSPSNQS
YIVIDKILEAIRQTGADAVHPGYGFLSENAAFAEALDKAGVAFIGPPVGAIKAMGDKITS
KKLAAEAGVSTVPGHMGLIANADEAVKIAAQIGYPVMIKASAGGGGKGMRIAWNDAEARE
GFQSSKNEAMNSFGDDRIFIEKFVDQPRHIEIQVLGDKHGTVLYLGERECSIQRRNQKVI
EEAPSPFLDADTRKAMGEQAVALAKAVGYYSAGTVEFIVDGNRNFYFLEMNTRLQVEHPV
TELITGLDLVEQMIRVASGETLAFAQADVTMTGWAVESRLYAEDPYRNFLPSIGRLSRYR
PPSEGQQADGTVVRNDTGVFEGGEISMYYDPMVAKLCTWGPDRITAIDAMSAALDRFEVE
GIGHNLPFLSAVMQHPRFRSGKITTAFIAEEFPEGFSGVEPDEMAGKTLAAIAALVHQRR
EARAAQVSGTMGNHARTIGRDWVVELAERSYPLTLPADPGSLMFADGSVVAVDGLWQPGQ
TLAIFTVNGQNIGLKIDLKGPAIRLRWRGMDVVAHVRNPRVAELARLMPRKLPPDTSKML
LCPMPGVVTGIAVAEGDAVEAGQALATVEAMKMENILKAERRGVVKRLVAKAGQSLAVDE
LIMEFE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttccaaaatcctgatcgccaaccgtggcgaaatcgcctgccgggtgatcaag
accgccaagcggatgggcattgccacggtcgctgtgtattccgatgccgatgccaatgcg
ctgcatgtcaagctggcggatgaggcggtgcatatcggcccgtcgccctccaaccaatcc
tatatcgttatcgacaagatcctcgaggcgatcaggcagaccggtgcggatgccgtgcat
ccgggctatgggtttctgtcggaaaatgccgcctttgccgaggcgctggacaaggcgggc
gtcgccttcattggcccgccggttggcgccatcaaggccatgggcgacaagatcacctcc
aagaagctggcggcagaggcgggggtgtccaccgtacccggccatatggggctgattgcc
aatgccgatgaagcggtgaaaattgccgcccagatcggctaccccgtgatgattaaggcg
tctgccggtggcggtggcaagggcatgcgcatcgcctggaacgacgccgaggcgcgcgag
ggtttccagtcctccaagaacgaggcgatgaactcgtttggcgacgaccggatctttatc
gagaaattcgttgaccaaccgcgccatatcgaaatccaggtgctgggcgataagcatggc
actgtgctctatctcggcgagcgcgaatgctcgatccagcggcgaaaccagaaggtgatc
gaggaagcgccatcgccgtttctggatgcggacacccgcaaggcgatgggcgagcaggcc
gtggcgctggccaaggcggttggatattattccgctggcacggtggaatttatcgtcgat
ggcaatcgcaatttctacttcctggaaatgaacacgcgcttgcaggtcgagcatccggta
acagaactgatcaccgggcttgatctggttgagcagatgatccgggtggcctctggcgaa
acgctggcttttgcgcaagcggatgtgacgatgacgggctgggcggtcgaaagccggctc
tatgccgaagacccctatcgcaatttcctgccgtcgatcggcagactgtcacgctaccgc
ccgcccagcgaaggccagcaagccgatggcacggttgtccgcaacgataccggggtgttc
gagggcggggaaatctcgatgtattacgacccgatggttgccaagctgtgtacatggggg
cctgaccggatcacggccatcgatgcgatgagtgcggcgctggaccggttcgaagtcgag
ggcattggccataacctgccgtttctgtcggcggtcatgcagcatccgcgctttcgctcc
ggcaagattaccacggcctttatcgccgaggagtttccagagggcttttccggggtcgag
ccggatgagatggcgggtaagacgcttgccgccattgcagcccttgtccaccagcggcgc
gaggcccgcgctgcgcaggtttccggcaccatgggcaatcacgcccgcaccattggccgt
gattgggtggttgagctggcagagcggagttatccgctgacgcttccggctgatcccggc
agtctgatgtttgccgatggcagcgtggtcgcggtcgatggcctgtggcagcctggccag
accctggcaatctttaccgtcaatggccaaaacatcgggcttaaaattgacctcaagggg
cctgctatccgactgcgttggcggggcatggatgtcgtggcgcatgttcgcaatccgcgc
gtcgccgagcttgcccggcttatgccccggaaattaccgcccgacacgtcaaaaatgctg
ctctgcccgatgccgggtgtggtgacaggcattgcggttgccgaaggcgacgccgtggag
gccggtcaggcgctggcgaccgtggaggcgatgaagatggaaaacatcctgaaggccgag
cggcgtggcgtggtgaagaggcttgttgccaaggctggccaaagcctcgcggtggacgaa
ctgatcatggaattcgagtga
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