Agrobacterium vitis VAT03-9: RvVAT039_41190
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Entry
RvVAT039_41190 CDS
T08809
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAT039_41190 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avv01007
]
RvVAT039_41190 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avv03016
]
RvVAT039_41190 (hisS)
Enzymes [BR:
avv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
RvVAT039_41190 (hisS)
Amino acid related enzymes [BR:
avv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RvVAT039_41190 (hisS)
Transfer RNA biogenesis [BR:
avv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RvVAT039_41190 (hisS)
Prokaryotic type
RvVAT039_41190 (hisS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BCH66903
LinkDB
All DBs
Position
2:complement(829418..831079)
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AA seq
553 aa
AA seq
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MPIMSEKTKKPQKLRARLPRGFVDRQAHDIRAVNEMTAKIREVYERYGFDPIETPLFEYT
DALGKFLPDSDRPNEGVFSLQDDDEQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGY
VFRNEKPGPGRFRQFMQFDADSVGAPGVQADAEMCMMMADTLEALGIQRGDYVIRVNNRK
LLDGVLDAAEVPDFKRLETLRSLDKFDKFGTGGVKLLLTNGRKDESGDFTKGVGLTEQQA
DSLLSIFAPGNSYRCSYLKEDGTVGFFEGNPDVIIQNWNDVLRSHNEIGLAKFFGAPSEN
PSLMALLNANIACKGQQKGMEGVVELLSMLRIFQDAGYDETRIRIDPSVVRGLEYYTGPV
YEAELTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKNLG
KLGADEVIAPVLITVMDGDVESMGRYQRFTQALRNEGIRAEMYQGNWKKFGNQLKYADRR
GSPIAIIQGGDEREQGVVQIKDLIEGKRLSGEITDNTEWREARVAQIVVPEAELVAKVKE
ILAAQADDRARAK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcatgagcgaaaagaccaaaaagccccagaaactgagagcccgcctgccgcgt
ggtttcgtggatcggcaagcccatgatatccgcgccgtcaacgagatgaccgcgaaaatc
cgcgaagtctatgagcgctacggcttcgatcccattgagacgccgctgtttgaatatacc
gatgcactcggcaaattcctgcccgacagcgaccgcccgaacgaaggcgtgttctcgctt
caggacgatgacgagcaatggatgagcctgcgctacgacctgaccgcgccgctcgcccgc
catgtcgcggaaaatttcaacgagatccagctgccctaccgcacctaccgcgctggctat
gtgttccgcaatgaaaagccgggtccgggtcgtttccgccagttcatgcagttcgatgcc
gacagcgttggcgcaccgggcgtccaggccgatgccgaaatgtgcatgatgatggccgat
acgctggaagcgctgggcatccagcgcggcgattacgtgatccgggtgaataatcgcaag
cttttggatggcgttcttgatgcagcagaggtcccagacttcaaaagattagagacactc
aggtcactagacaagttcgataaatttgggactggcggcgtaaagcttctccttacaaat
ggaagaaaagacgagagcggtgactttaccaaaggcgtaggcttaaccgaacagcaagca
gattctctgctatcaatttttgcgccaggaaattcataccgttgcagctatttgaaggaa
gacggcactgttggtttcttcgaaggaaaccctgatgtaataattcaaaattggaacgac
gtattaagaagtcataatgaaattgggttggcaaaattttttggcgcaccatctgaaaat
cctagtttaatggcccttttaaatgcgaacattgcttgcaagggtcagcaaaagggcatg
gagggggtcgtagagttgctttctatgttaagaatattccaagatgccggttatgacgaa
acacgtatccgcatcgacccatccgtcgtccgcggcctcgaatactacaccggccccgtc
tacgaagccgaactgaccttcgacgttaccaatgaaaaaggcgaaaaggtcgtgttcggc
tcagttggcggcggtgggcggtatgatggcctcgtctcgcgcttcatgggccagcccgtt
ccggccaccggcttttccatcggcgtctcccgcctgatgacggccttgaaaaacctgggc
aagctgggcgctgacgaagtaatcgcgccggttctgatcacggtcatggatggcgatgtc
gagagcatggggcgttatcagcgctttacccaggcgcttcgcaatgaaggcattcgcgct
gaaatgtatcagggcaactggaagaaattcggcaatcagctgaaatatgccgatcgtcgc
ggctcccccatcgccatcatccagggcggcgatgagcgcgaacagggcgtggtgcagatc
aaagacctgatcgaaggcaagcgtctgtcgggcgagatcaccgacaacaccgaatggcgc
gaagcccgcgtggcacagatcgttgtgccggaagcagagctggtggccaaggtgaaggaa
attctggccgcccaggcggacgatcgggcgcgggcgaagtag
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