Agrobacterium vitis VAT03-9: RvVAT039_42380 Help Entry RvVAT039_42380    CDS       T08809                                  Symbol clpB Name (GenBank) ClpV1 family T6SS ATPase   KO K11907   type VI secretion system protein VasG Organism avv  Agrobacterium vitis VAT03-9 Pathway avv03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:avv00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     RvVAT039_42380 (clpB)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:avv02044]     RvVAT039_42380 (clpB) Secretion system [BR:avv02044]  Type VI secretion system   Imp/Vas secretion system core components    RvVAT039_42380 (clpB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 Sigma54_activat AAA_22 Clp_N NACHT TniB nSTAND3 Zeta_toxin AAA_25 AAA_7 IstB_IS21 SRP54 SLFN-g3_helicase ATPase_2 DUF7096 Cep57_MT_bd Torsin NBD_SMAX1 DUF815 Motif Other DBs NCBI-ProteinID:  BCH67022 UniProt:  A0AAN1X5M4 LinkDB All DBs Position 2:966662..969373 Genome browser AA seq 903 aa AA seqDB search MSHIDLNRLIESLEPDLRVALETAASTAAGRGHGQVDIAHLLAAVMDAASFQPVLEQLGL PIVALRREVSDALDDTVVSGSGQLALSQNILTLGREAWICASLQSGRRAITLADIFAAMD DEPSLRALTRGRFPSLRMLDRTALETLLQTDVVAETPKSSLSPAPVREDEFLRLYTHDLT EDARAGRLDPVVGRDGELRQMIDILLRRRQNNPILVGEAGVGKTAVAEALALEIAAGRVP EKLQSVRLLMLDLTLLQAGAGVKGEFERRLTGVIEAVKRSPEPIILFIDEAHGLIGAGGA SGQGDAANILKPALARGEVRTIAATTWSEYKKYFEKDAALTRRFQPVHVREPDEETAIRM LRGIAETFMAHHGVKIRDEAIVAAVQLSARFLPARQLPDKAVSLIDTAAATVSLARQTVP EQLLLLKSELAHLTVETDWLAREPENTDVQERRQAVATEMERLAKEIDSLQARYDAEIAA LAASDEAPAVDNDTTASLDVADVNVTPLITPLRTRGLTRRAASLAPTSAGEEKLVPHEVD RNVVAAVLARWTGIPLGKLLADQIESAKSLDMRLKEKVIGQDAALERIGDAMRAARAGLS DPRRPPAVFMLVGMSGTGKTETALTLADLMYGGSQHLTTINMSEFKEEHKVSMLLGAPPG YVGYGEGGVLTEAVRRRPYGVLLLDEIDKAHPGVQDIFYQVFDKGMLRDGEGRDVDFRNT TIFMTANTGSELLASLALDPDTMPEGEALEALLMPELQKQFKPAFLGRTLLLPFMPLGKD ALSRIVDIQIDRIRERISSAYGTDLVLSEEARNALVGRAVASEIGARAIEIMIGRDLLPP LSSFFLELVASGAKVTEAQVTHDEKGFGVRAGAAGGKEEFADASGASVDKDAASEGVSRR MRQ NT seq 2712 nt NT seq  +upstreamnt  +downstreamnt atgtcgcatattgacctcaatcgattgatcgaatcgcttgagcctgatttgcgtgtcgcg cttgagacggctgcatccacagccgccgggcgcggacacggacaagttgatattgctcat ctgcttgccgccgtcatggacgcggcgtcgtttcaaccggtgttggaacaattgggcttg cccattgtagcacttcgccgcgaagtcagcgatgcgctcgatgacacggtggtgtccggg tccggtcagctcgctttatcccagaatattctgactttgggtcgtgaggcctggatctgt gcgtcgctccagtctggaagacgtgccattacgcttgccgatatatttgcggccatggac gatgagccgtcgcttcgggccttgacccgcggtcgcttcccgtcgctcaggatgctggat cgaacggcactcgaaactctgttgcagacagacgttgtcgccgagacgccaaaatcttcg ctgtctccggccccagtccgggaagacgagttcctgcggctttacactcatgaccttacc gaggacgcgcgtgcgggccggcttgatccggtcgtcggccgtgatggcgaacttcgccag atgatcgacatcttgttgcgccggcgacagaataacccgatcctggtcggtgaagcgggc gttggcaagacagcggtggccgaagcgctggcgctggaaattgccgccggacgcgtgccg gaaaaattgcaatccgtacggctgctgatgcttgatctgactctgttgcaggcaggcgct ggcgttaagggtgagttcgagcggcggttgaccggcgttatcgaagcggtgaaacgttcg ccggagcctatcatcctgtttatcgatgaagcgcatggcctgatcggtgccggtggggca agcgggcagggcgatgccgccaatattctcaagcccgcgctagcgcggggcgaagtgcgg accatcgctgccacgacttggagcgaatataagaagtatttcgaaaaagatgccgcactg accagacgcttccagcctgtgcatgtgcgtgagccggacgaggaaaccgcgatccgcatg ttacgcggaatagctgagaccttcatggcccatcatggggtaaagatccgtgacgaggct atcgtcgctgccgtgcaactttctgcgcgcttcctgcccgctcgccaattgcctgataag gcggtgagcctgatcgataccgccgcagccacggtttcgctggcgcgccagacggtgccg gaacagttgctgcttcttaaaagcgagcttgcgcatctcacggtcgagaccgactggctt gcccgtgagccagaaaatacggatgtgcaggagcgccgccaggcggttgccactgaaatg gagcgtctggctaaggaaatcgatagcctccaggcgcgctatgatgctgaaattgcagcg ctggcagcgagtgacgaagcgcccgccgtagacaatgatacgacagcgtccctggatgtt gctgacgtcaatgtcaccccgttgatcactcctctgcggacacgggggcttacccgccgc gcggcgtctctggcgccgacctccgctggcgaagaaaagcttgtgccgcatgaggtcgat cgcaatgttgttgccgccgtcctggcgcggtggaccggcattcctctcggcaaactgctt gccgaccagattgaaagcgcaaaaagcctcgatatgaggctgaaggaaaaggtgatcggt caggatgccgcactggaacggatcggtgacgccatgcgcgcggcgcgcgccgggctttcc gatccacgccgtccgcctgccgtgttcatgctggtcggcatgtcgggaaccggtaaaacc gaaaccgcgctgaccctggctgatctgatgtatggtggtagccaacatctgacgacgatc aacatgtcggagttcaaggaagagcataaagtatccatgctgctaggcgcacctccgggc tatgtcggctatggcgaaggcggcgtgctgaccgaagccgtgcggcgtcggccctatggc gtgctgttgctcgacgaaatcgacaaggcgcatcccggcgttcaggatattttttatcag gtgttcgacaagggaatgttgcgcgacggcgaaggccgcgatgttgatttccgcaatacc acgattttcatgacagccaataccggctcggaattgctggcctccttggcccttgatcca gacaccatgcccgaaggtgaggcgttggaagcattgttgatgccggaactgcaaaagcag ttcaagccggccttcctcgggcgcacgctgctgttgccgttcatgccgctcggcaaggat gccctgtcgcggatcgtcgatattcagatcgaccgcattcgggagcggatttcttcggcc tatggaacagatcttgttctgtccgaagaggcccgcaatgcgctggtcggacgcgccgtt gcaagtgagatcggagcccgcgccatcgaaatcatgattggccgggatctgctgccgccg ctttccagcttcttccttgagctggtcgcatctggcgcaaaggttaccgaagcgcaggta acccatgatgaaaaagggttcggcgttcgcgccggggccgctgggggaaaagaggaattc gccgatgcctcgggtgcatcggtggataaggatgccgcgtcggaaggggtatccagacgc atgcggcagtga

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