Agrobacterium vitis VAT03-9: RvVAT039_42460
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Entry
RvVAT039_42460 CDS
T08809
Name
(GenBank) transcriptional regulator
KO
K03892
ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avv03000
]
RvVAT039_42460
Transcription factors [BR:
avv03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
RvVAT039_42460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_20
HTH_5
DUF7347
MarR
HTH_24
MarR_2
HTH_34
HTH_Crp_2
B-block_TFIIIC
HTH_11
HTH_69
Fe_dep_repress
HTH_10
TrmB
HTH_IclR
FAN1_HTH
HTH_HVO_0163_N
Rrf2
Penicillinase_R
HTH_36
DUF7343
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
BCH67030
UniProt:
A0AAN1X452
LinkDB
All DBs
Position
2:978242..978613
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AA seq
123 aa
AA seq
DB search
MDQKQALSAFAALSQETRLLIVRMLVVAGPDGMAAGALAEKIDVSPSNISFHLKELEHSG
LIAAQRQSRSIIYTANYAALGGLVRFLMEDCCSGHPEICAPVAELAVCCAAGSKPPVARE
LER
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaacaggctctctccgccttcgccgctctttcccaggaaacccggctgctg
atcgtccgtatgcttgttgtggctgggccagatggcatggcggccggtgcgctcgccgaa
aagatcgacgtgtctccctccaatatctcctttcacctcaaggagcttgaacattccgga
ttgattgccgcgcaacggcagtcacggtcgattatttacaccgccaattatgccgccctg
ggcggacttgtccggtttctgatggaggattgctgttcaggacatcccgaaatttgcgcg
cccgttgctgagcttgccgtctgctgcgctgcgggatcgaagccgccggttgccagggaa
ttggagcgataa
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