Agrobacterium vitis VAT03-9: RvVAT039_42600
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Entry
RvVAT039_42600 CDS
T08809
Symbol
dadB
Name
(GenBank) alanine racemase, catabolic
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00470
D-Amino acid metabolism
avv01100
Metabolic pathways
avv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RvVAT039_42600 (dadB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RvVAT039_42600 (dadB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
RvVAT039_42600 (dadB)
Enzymes [BR:
avv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RvVAT039_42600 (dadB)
Peptidoglycan biosynthesis and degradation proteins [BR:
avv01011
]
Precursor biosynthesis
Racemase
RvVAT039_42600 (dadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
BCH67044
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All DBs
Position
2:complement(996986..998110)
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AA seq
374 aa
AA seq
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MDMSISQDMNADAFSARLVIDLDALADNYRQLAAEATPAETSAVVKADAYGLGAARVGPA
LYRAGCRKFFVANVQEAAGLRQHLPGDAELFILNGLQPGAEPFAAANGFIPVLNSLEQLA
NWSKTASEFGRTLPAILQFDTGMSRLGFSPEEANVLAGDPALLSGLSIRYIMSHLASADD
SASTQNAAQFSVMRERLAQFPGIALCFSNSGGIFIDKQFHGALVRPGVALYGAVPSDLAG
RRMKPVVRVDAKVIQTRTVPAGACVGYGATYVATKETRLATIAIGYADGLPRCLSDRGAA
YYDDIRLPIVGRVSMDSMTLDISALPPGTLTLGSLVEMIGPHQSLEDVAQAAGTIAYEIL
TSLGHRYHRDYISA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtctatcagccaggatatgaatgccgatgcgttttccgcccgcctcgtgatc
gacctcgacgcgcttgccgacaattaccgccaattggccgctgaggccaccccggcggaa
acctccgccgtcgtcaaggccgatgcctatggccttggagccgcccgcgtcggccccgcg
ctctaccgggctggatgccggaagttctttgtggcgaatgtgcaggaagccgccgggcta
aggcagcatttgcctggggatgccgaactgttcattctcaatggcttacagccgggcgca
gaaccctttgccgcagcaaatggcttcataccggtgctgaattcgctggaacagcttgcc
aactggtcgaaaacggcaagcgagttcggacgaaccctgcccgcgatcctgcaatttgat
accggtatgtcgcggctcggattttcaccggaagaagccaatgtgcttgcaggcgacccc
gccctgttatccggcctctccatccgctacatcatgagtcatctcgcctcagccgatgac
agcgccagcacccagaatgccgcgcaattttcggtcatgcgcgagcgattggcgcaattt
ccgggcattgccttgtgcttttccaattcgggcggcatctttatcgacaagcagtttcac
ggcgcgttggtccgccccggcgttgccctttacggtgcggtgcccagcgatctggcaggg
cgccgcatgaagccggtggtgcgggtcgatgcgaaggtgatccaaacccgaacggtacca
gccggagcctgcgtcggctacggcgcgacctatgtggccaccaaggaaacccggctggcc
accatcgccatcggttatgctgatggcctgccgcgttgcttgagcgaccgtggtgccgct
tactatgatgatatccgtttgccaattgtcgggcgggtttcgatggacagcatgacactc
gatatttcggccctgccacccggcacgttgacgctgggaagtctggtggagatgattggt
ccgcaccagagccttgaggatgtggcgcaagcagcgggtaccatcgcgtatgaaatcctg
accagccttggtcatcgctatcaccgcgactatatttcagcataa
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