Agrobacterium vitis VAT03-9: RvVAT039_42700
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Entry
RvVAT039_42700 CDS
T08809
Name
(GenBank) polyamine ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_42700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_42700
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAT039_42700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF6050
NiFe_hyd_3_EhaA
DUF2937
Motif
Other DBs
NCBI-ProteinID:
BCH67054
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All DBs
Position
2:1006695..1007495
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AA seq
266 aa
AA seq
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MLLNFNSLGTWKWILLVITLLTAAFLLLPILFIAALSFGSSQWLIFPPPAWTTKWYGQLF
ADPRWLDAAWTSFRIAVIVTILSVLIGLCASFGLVRGRFLGRDALRALFMTPMILPVVVL
AVALYAFFLRIGLNGTTLGFVIAHLVVALPFSILALTNALEGFDKSIEDAAVLCGASPLK
ARLLITLPCIGHGLFSAAVFSFLTSWDEVVLAIFMASPTLQTLPVKIWATLRQDLTPVIA
AASTLLIAVTIALMLITALVRKGLKA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgaatttcaacagccttggcacctggaaatggattttgctggtcatcacgctg
ctgacggcggcttttctcttgctgccaatcctgttcatcgccgccctgtccttcggctcc
tcgcaatggttgatttttccgccaccggcctggaccacaaaatggtatggccagctgttt
gccgatccgcgctggctggatgcggcctggaccagttttcgcatcgccgtcatcgtcacg
atcctgtcggtgctgatagggctttgtgcttcgttcggcctggtgcgtggacggtttctg
gggcgggatgcgttgcgagcactgttcatgacgccgatgatcctgcccgttgtggtgctg
gccgtggcgctctatgcgtttttcctgcgcatcggtctgaacggcacgacactcggtttc
gtcatcgcccatctggttgtcgcactgccattctctattctggcgctgaccaacgcgctg
gaaggttttgacaaatctatcgaggatgcggcggtgctgtgcggggcctcgccgctgaag
gcgcggctgttgatcacgctgccctgcatcggccacggcttgttttcggcggcggtgttt
tccttcctgacctcctgggatgaagttgttctggctattttcatggcaagcccgaccctg
caaaccctgccggtaaagatctgggcaacgctgcgtcaggatctgacgccggtgattgcc
gctgcctccacccttctgatcgccgtcaccattgcgttgatgctgatcaccgccctggtg
cgcaaaggattgaaagcatga
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