Agrobacterium vitis VAT03-9: RvVAT039_42790
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Entry
RvVAT039_42790 CDS
T08809
Name
(GenBank) ribose ABC superfamily ATP-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
avv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_42790
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RvVAT039_42790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_42790
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RvVAT039_42790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
zf-Vps39_C
Motif
Other DBs
NCBI-ProteinID:
BCH67063
LinkDB
All DBs
Position
2:complement(1016139..1017176)
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AA seq
345 aa
AA seq
DB search
MSEFEETRDRGRFMGDLKLSRRGVLSAGAALTVAAALSRPRMAGAEDLKFCASLGWTVWE
SGRHIVNGYKDAVSRLGGTLTIADANYDIKKQADQIASFVASKPAAIFITPADAAAISPA
VQAAVASGIPIFCGDSYVPNTTVTSTAMSNNFGLGAAGAEYIAKRLNGKGQVALVSLPSN
ESWDQRTLGAKSVFVRFPDIKVVSEIAFALGGTTTPRQVVDNILTANPELNAIWCAWDGA
ASEGTLAIRAAGRKVFITGIDGGRQSFEYIKAGSPFAMTMAQSFYEMAYMNAFYAHEVVA
GRKAPRFVITPSYAVTEDSLKPLKDIPDNYDQPGEAIKLGWARAL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattcgaggaaaccagggatcgcggccggtttatgggcgatctgaaactgagc
cgtcgtggcgtgttgagcgccggtgcggcacttaccgtggcagcggcattgagcaggcca
cgcatggcgggtgctgaagatctgaaattctgcgcctcgctgggctggactgtctgggaa
tcgggtcgccatattgtcaatggctataaggacgctgtctcgcgtcttggcggaactttg
accattgccgatgccaattacgacatcaagaaacaggccgatcagatcgcctccttcgtg
gcgtccaagccagcggccatctttatcacgcccgctgatgccgccgcgatctcgcctgcc
gtgcaggctgcggttgcctccggcatcccgattttctgtggtgacagctatgtgcccaac
accacggtaacatccacggccatgtcgaataatttcggcctcggggcggccggggcggaa
tatattgccaaacggctgaacggcaagggacaggtcgccctcgtcagcctgccctccaac
gagtcctgggaccagcgcaccttgggcgcaaaatcggtgttcgtccgctttccggatatc
aaggtcgtctcggaaatcgccttcgccctgggtggcacgacgacaccgcgccaagtggtg
gacaatatcctgacggccaatcctgagttaaacgccatctggtgtgcctgggatggcgca
gcctccgaaggcacgctcgccattcgtgccgcaggccgcaaggtattcatcaccggcatc
gatggtggccgccagtcgtttgaatatatcaaggccggatcgccttttgccatgaccatg
gcgcagagcttctacgaaatggcctatatgaatgccttttatgcccatgaagtcgtggca
ggccgcaaagcgccacgtttcgtcatcacgccgtcctatgcggtgacagaggacagcctg
aagccgctcaaggacattcccgacaattacgatcagccgggcgaagccatcaagcttggc
tgggcgcgcgcgctttaa
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