Agrobacterium vitis VAT03-9: RvVAT039_43320
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Entry
RvVAT039_43320 CDS
T08809
Symbol
dctB
Name
(GenBank) two-component sensor histidine kinase
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RvVAT039_43320 (dctB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
avv01001
]
RvVAT039_43320 (dctB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
avv02022
]
RvVAT039_43320 (dctB)
Enzymes [BR:
avv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RvVAT039_43320 (dctB)
Protein kinases [BR:
avv01001
]
Histidine kinases
NtrC family
RvVAT039_43320 (dctB)
Two-component system [BR:
avv02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
RvVAT039_43320 (dctB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
dCache_1
HisKA
HATPase_c_5
HATPase_c_2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BCH67116
UniProt:
A0AAN2BWX3
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All DBs
Position
2:1074077..1075879
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AA seq
600 aa
AA seq
DB search
MLAFLACVVTLLALYLVGLYARTAALEDLSEQARTSANLKVAFLRAVLERPRSLPLLLSE
DQQVVDALSLRTVAATERLNDKLERLVAGTSASVLYVTDATGHAIASSNWREPVSFVGID
YSFRDYFRQSMLAGTAEHFALGSISKRPGLYISRRVGPASAPLGVVVVKAEFAQLESDWR
EEGRAAFVTDGNGVVLISSLPSWRFMTLAALQPEELVQIRNSLQFGDAPLQALPINRAQQ
VPGSGIPDELLVRTVFPGAIPADYLDLSVAVPTTSWHLNYLVPTEPAIAASMREWRLLTL
ALLAPFFLVVSLVLWRRQATVIRLARVEADQLELERRVDERTHDLSRARDRLELEIAGHK
TTEQRLQGVQQELVQANRLAILGQVAAGVAHEINQPVATIRAYAENARVFLERAQPEQAN
SNLGAIALLTERIGTITDELKAFARKGRTAPEPVPLGAAIEGAVMLLRSRFAGRLEALSL
PDVAPDLTVKGNRVRLEQVLINLLQNALEALEQRSDGRVEVSVQETEQHVVVTIEDNGPG
IPEDIRRLLFTPFTTSKEKGLGLGLVISRDIISDYGGRIGVESTPSGTCFTIHLLKADIS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
ttgctggcgttcctagcctgtgttgtcaccctccttgcgctttatttggttgggctttat
gcccgcactgccgcattggaggatttgtccgagcaagcgcgcaccagcgccaatctcaag
gtggccttcttgcgggcggtgttggagcgccctcgttccttgccgttgctgttgtcggag
gatcaacaggttgtggatgccctgagccttcgcacggtcgccgcgacagaacgattgaac
gacaagctcgagcgtttggttgcaggaacaagtgcttcagttctttacgtcacggacgcg
acaggacatgccattgcctccagcaattggcgagagccggtgagctttgttggcatcgac
tattcttttcgggactattttcgccaatccatgctggccggcacagccgaacatttcgcg
ctcggcagcatcagcaagcgtccaggcctttatatttccaggcgtgtcggcccggctagt
gcccccttgggggttgtggtcgtgaaggcagagttcgcgcaattggaaagcgattggcga
gaggagggccgagcggcttttgtcactgacgggaatggggtagtgctaatttcaagtctt
ccgtcctggcgcttcatgacattggctgcattgcagccggaggagttggtccaaatacgc
aacagtttgcaattcggcgatgcgcctttgcaggccctgcctatcaatcgcgcccagcag
gtgccaggcagcgggataccggacgagcttttggtgcgtacggtttttcccggcgccata
cctgccgactatcttgatctatcggtcgcggtgccgaccaccagctggcatctcaactat
cttgtcccgaccgaaccggcaatcgcggcgtcgatgcgggaatggcgactgttgaccttg
gccctgctggcgccattttttctggtggtctcgctggttctttggcggcggcaggcaacg
gttatccgtctggcgcgggtggaggccgaccagctggagctggagcgacgggtggatgaa
cgaacccacgacctttcacgggcccgagaccggctggaattggagatcgccggccacaag
accaccgaacagcggctgcaaggtgtccagcaggaattggtccaggccaaccggctggct
atcctggggcaggtggcggcgggcgttgcccatgaaatcaaccagcctgtcgcaacgatc
agggcctatgctgaaaatgccagggtgtttctggagcgtgcccagccggagcaggcaaac
agcaatcttggcgccattgccttgctgacggagcggatcggtacgatcaccgatgaattg
aaggcttttgcccgcaagggtcggaccgcgccggaaccagtgccgcttggagcggcgatc
gagggcgcggtcatgctgctgcgcagccgttttgccgggcggctggaggcgctttccctt
cccgatgtggctccggatctgacggtgaaaggcaacagggtccgcctcgagcaggtcctg
atcaatcttctgcagaatgcgctcgaagcattggagcagcgcagcgatggccgggttgag
gtctccgttcaagagacggagcaacatgtcgtggtgaccatcgaggacaacggtccgggt
attccagaggatatcaggcgtctgctttttacccccttcaccacctcaaaggaaaaaggt
cttggtcttggcctggtgatttcccgtgacattatcagtgactatggcggccggattggt
gtcgaaagcacgccatccggtacatgctttaccatccatcttttgaaagcggatatatca
tga
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