Agrobacterium vitis VAT03-9: RvVAT039_pl00080
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Entry
RvVAT039_pl00080 CDS
T08809
Name
(GenBank) ABC transporter permease
KO
K10544
D-xylose transport system permease protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_pl00080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl00080
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
RvVAT039_pl00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
UPF0253
Motif
Other DBs
NCBI-ProteinID:
BCH67175
UniProt:
A0AAN2BWE9
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All DBs
Position
pRvVAT039a:complement(8620..9882)
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AA seq
420 aa
AA seq
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MSNNMSNPETKSSQALDRSDERVTHDDGVLAMLRSFINRIKSGDLGMLPVAIGLIVISTV
FSILNPVFLAPNNLVNLLFDCATVGIISLGIVCVLLLGEIDLSVGSMSGLASAIIGVLWV
NSGLPVVVAIFAALVTGAVVGALYAVMYNRMGMPSFVATLSGLLALLGMQLYILGPTGSI
NLPYASPLVRFGQILVMPHWLSFTLALVPGIVMVVFGLSVRKRRQAVNLSSKPLSGLLIK
AAILTLGFEFAVYYLNLGRGVPWMFALFVALVVVVNYLLTKTQWGRSMFAVGGNREAARR
AGINVRRIYMSAFMLCSTLASLGGVLSASRLASSSQQAGTGDVNLNAIAAAVIGGTSLFG
GRGSAYSALLGIIVIQAISNGLTLLNLSSSLRYMITGAVLAIAVIVDSLARRSRVSHGRA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaatatgtcgaaccctgaaaccaagtcctcccaagccttggaccgcagcgat
gagcgcgtcacccacgatgatggtgtgctggccatgctgcgcagttttatcaatcggatc
aaatcgggcgatctcggcatgttgccggttgccattgggctgattgtgatttccaccgtg
ttcagcattctcaatccggtttttctggcacccaacaatctggtcaatctgctgtttgat
tgcgcaacggtgggcatcatttcgctgggcattgtctgcgtgctgctgttgggtgagatt
gacctctcggttggctccatgagtggtctggcctcggctatcattggcgtgttgtgggtc
aattccggccttccggttgttgttgcgatttttgcagcgctggtcacaggtgctgtcgtg
ggggcgctttacgcggtaatgtacaatcgcatgggcatgccaagctttgtcgccacgctg
tctggcttgttggctttgctgggcatgcagctctacattctcggcccaacgggcagtatc
aatttgccgtatgcctcacctctggtgcggtttggccagattttggtgatgccgcattgg
ctgtccttcaccctggcattggtgcccggtattgtgatggttgtgtttggcttaagcgtg
cgcaagcgccgccaagcggtcaacctgtcctcaaagcccttgagtgggttgttgatcaag
gccgcaatcctgacgcttggcttcgaatttgcagtctactatctcaatctcggacgcggc
gtgccttggatgtttgcgctgttcgtggcgctggtggtggtggtcaattacctgctgacc
aagacacaatggggccgctcgatgtttgccgtaggtggtaatcgcgaagccgcccgccgg
gcaggcatcaatgttcgccgcatttatatgagcgcctttatgctgtgctccactcttgca
tcccttggcggcgtgttgtcggcatcgcgcctcgcatcctccagccagcaggcaggcacg
ggtgatgtgaatttgaacgccattgccgccgccgtgattggtggcaccagcctgtttggc
gggcgtggcagtgcctattcggcgctgctcggcatcatcgtcattcaggcgatttccaat
ggtttgacgcttctcaacctcagctcatcgctgcgttacatgatcaccggggccgtgctt
gccattgccgtgattgtggattcgctcgcgcgccgctcccgtgtcagccacggccgcgcc
taa
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