KEGG   Agrobacterium vitis VAT03-9: RvVAT039_pl00200
Entry
RvVAT039_pl00200  CDS       T08809                                 
Symbol
nrdF
Name
(GenBank) ribonucleoside-diphosphate reductase subunit beta
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
avv  Agrobacterium vitis VAT03-9
Pathway
avv00230  Purine metabolism
avv00240  Pyrimidine metabolism
avv01100  Metabolic pathways
avv01232  Nucleotide metabolism
Module
avv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
avv_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:avv00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    RvVAT039_pl00200 (nrdF)
   00240 Pyrimidine metabolism
    RvVAT039_pl00200 (nrdF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avv03400]
    RvVAT039_pl00200 (nrdF)
Enzymes [BR:avv01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     RvVAT039_pl00200 (nrdF)
DNA repair and recombination proteins [BR:avv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    RvVAT039_pl00200 (nrdF)
SSDB
Motif
Pfam: Ribonuc_red_sm
Other DBs
NCBI-ProteinID: BCH67187
LinkDB
Position
pRvVAT039a:20280..21269
AA seq 329 aa
MNIQMKTNTPKQTKPVRAINWNRIDDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWAALKP
EEQQLTIRVFTGLTLLDTIQTSIGAPTLMEDSITPHEEAVYSNISFMEAVHARSYSSIFS
TLCSTSDVDDAYRWSEENEFLQKKSALILEHYRNPDPLKRKIASVFLESFLFYSGFYLPM
FWSSRARLTNTADMIRLIIRDEAVHGYYIGYKFQRGLEPLSEEQRQEIKDFAFDLLLELY
DNEAKYTEALYDGVGLTEDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNA
DENHDFFSGSGSSYVIGKAVATEDEDWDF
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaacatacagatgaagaccaacaccccgaagcaaaccaagccggtgcgtgcgatcaac
tggaaccgcatcgacgacgacaaggacctggaggtctggaacaggctgaccggcaatttc
tggctgccggagaaggtgccgttgtcaaacgacatcccatcctgggcggcgttgaagccg
gaagaacaacagttgaccatccgcgtcttcacggggctgaccctgctcgataccatacag
acgagcatcggtgcgccaacgctgatggaggattccatcacgccgcatgaggaggcggtc
tattcgaacatttcgttcatggaagcggtgcatgcccgttcctattcctcgatcttctcg
accctgtgttcgacgtctgacgtggatgatgcctatcgctggtctgaagaaaacgagttt
ctgcaaaagaagtcggcgctgatcctcgaacactaccgcaatcctgacccactgaaacgc
aagatcgccagtgtgttcctggaaagcttcctgttttactccggcttctatctgccgatg
ttctggtcgagccgcgccaggctcaccaacacggcagacatgatccgtctcatcatccgc
gacgaggctgtgcatggctattacatcggctacaagtttcagcgtggtctcgagccctta
agcgaggagcagcggcaggaaatcaaggatttcgccttcgatctgctgcttgagctctac
gacaacgaggctaaatacaccgaggcgctctatgacggtgtcggactgacagaggacgtc
aaaaaatttctgcattacaacgcgaacaaggcgctgatgaacctcggctacgaggctctg
tttccgccggaggcctgcaaggtcaatccggcaatcctgtcggcactctcgccgaatgcc
gatgagaatcatgatttcttttcgggctcaggctcgtcctatgtcatcggcaaggcagtt
gcgactgaggacgaggactgggatttttaa

DBGET integrated database retrieval system