Agrobacterium vitis VAT03-9: RvVAT039_pl01510
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Entry
RvVAT039_pl01510 CDS
T08809
Name
(GenBank) IS30 family transposase
KO
K07482
transposase, IS30 family
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RvVAT039_pl01510
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
rve
HTH_23
HTH_32
HTH_29
rve_3
HTH_28
HTH_36
Motif
Other DBs
NCBI-ProteinID:
BCH67318
LinkDB
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Position
pRvVAT039a:157167..158177
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AA seq
336 aa
AA seq
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MKRTYSHIDLDERRKIARWRMAGQSIEMIAETLGRHRSTIFREIKRNTFIDEVVPDLNGY
YCVTAHDMACERRAKLRKLARFSNVRQSVIDRIMHGWSPQQIAGRMRLEQHPIFVSHETI
YKFAYSADGHAIKLWRHLPEHRAKRRPRHARRKHGQRFGPELNILHRPNVVAERKQFGHW
ECDLIQFRKKFGKANVTSLVERVSRFTILLRNNDRQSRPVMDGIIQALKSLPHLARRSMT
FDRGTEFTDWPYLQAGIGTQTWFCDPQSPWQKGTVENTNRRARKWLSRDVDPLSVAAADL
MEICNRLNQTPCKCLGYRTPAEVFRKKLLAQMRHAS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacttactcccatatcgacttggacgaacgtcgcaagatcgctcgctggcgt
atggcgggccagagtattgagatgatcgccgagacactcggtcgccatcgctcgacgatc
tttcgtgaaatcaagcggaatacgtttatcgatgaggtggtcccggacctcaatggctat
tactgcgtcacggcgcatgacatggcttgcgaacggcgggccaagctgcggaagctggcg
cgtttttcgaatgtgaggcagtccgtgattgaccggatcatgcatggttggtcgccccag
cagatcgccggtcgcatgcggctggaacagcatccgatctttgtcagtcacgagacaatt
tacaagttcgcatactcggccgacggtcatgccatcaagctgtggcgtcacctgccggag
catcgagctaagcgacgcccacgacatgcaagacgtaagcatggtcaaaggtttggcccg
gaactcaacattctgcatcgtccgaacgtcgttgctgaacgcaagcagttcggacattgg
gaatgcgatctgattcagttccggaagaagttcggcaaggccaacgtgacatcgcttgtt
gagcgggtgagccgctttacgatcttgctacgtaacaatgatcgccagtcccgcccggtc
atggatggcatcatccaggcgctgaagagcctccctcacctcgcccgccgatcgatgaca
tttgaccgaggcaccgaattcactgactggccgtaccttcaggcaggcataggcacgcaa
acatggttttgtgacccacaatcgccctggcaaaaaggaacggtcgaaaataccaaccgg
cgagcgcgaaaatggctttcgagagacgtcgatcccttgtccgtagccgccgccgatctg
atggagatctgcaatcggcttaatcagacaccgtgtaaatgcctcggctaccgaacgccg
gctgaggtcttccgcaagaaactgctcgcgcagatgcgacatgccagctag
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