Agrobacterium vitis VAT03-9: RvVAT039_pl01920
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Entry
RvVAT039_pl01920 CDS
T08809
Symbol
nikD
Name
(GenBank) nickel import ATP-binding protein NikD
KO
K15587
nickel transport system ATP-binding protein [EC:
7.2.2.11
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_pl01920 (nikD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl01920 (nikD)
Enzymes [BR:
avv01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.11 ABC-type Ni2+ transporter
RvVAT039_pl01920 (nikD)
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Nickel transporter
RvVAT039_pl01920 (nikD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
SMC_N
AAA_16
nSTAND1
oligo_HPY
AAA_25
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BCH67359
LinkDB
All DBs
Position
pRvVAT039a:201591..202379
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AA seq
262 aa
AA seq
DB search
MIQTLSIHNLTVYPSHADGHPALVDHLSLELKRGRILALVGASGSGKSLTCSASLGVAPA
GVTVTNGTLALDGQPVLPADLRGKTVATILQNPRSAFNPVRTMRHHVIETLKATGRLPPD
HDLQQALAFMHDAGLEEPQRILEMHAFEMSGGMLQRMMIALALMSGAPFLFADEPTTDLD
LIVQMQVLDLIERVARQQGLGVLLVTHDMGVVARLADDVAVIDQGKLVETGSVIDIFHAP
QHPVTRMLVQAHLSLYGLELAQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaccctctccatccacaatctcacggtttacccatcacacgccgatggtcat
cccgctcttgtcgatcatctctcgcttgagctcaaacgtggccgcattctggcgctggtt
ggtgccagtggttcgggaaaatccctgacctgttcagcaagccttggggtcgcccctgcg
ggtgtcacggttaccaatggcactctggcgctggatggtcagcccgtcttgcctgcggac
ttgcgtggcaagacggtggccaccattttgcaaaacccgcgcagcgcctttaatccggtg
cgaaccatgcgccatcatgtgattgaaacactgaaagccacgggtcggttgccaccagat
catgacctgcaacaggctttggcctttatgcacgacgcggggcttgaggagccgcagcgc
attctggagatgcatgcttttgagatgagcggcggcatgttgcaacggatgatgattgcc
cttgctttaatgtccggtgccccctttctgtttgccgatgagccaaccacggaccttgat
ctgattgtgcagatgcaggtgctggatctgatcgagcgcgtggccagacaacagggcttg
ggcgttttgctcgtcacccatgacatgggcgtggtggcgcgtttggccgatgatgtggcg
gtgattgatcaaggcaagctggttgagacgggcagcgtcatagacattttccatgcgccc
caacatccggtaacacgcatgttggtgcaggcacacctctccctctacggtttggagctg
gcgcaatga
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