Agrobacterium vitis VAT03-9: RvVAT039_pl01960
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Entry
RvVAT039_pl01960 CDS
T08809
Name
(GenBank) periplasmic binding protein
KO
K02016
iron complex transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl01960
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron complex transporter
RvVAT039_pl01960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
BCH67363
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All DBs
Position
pRvVAT039a:204610..205854
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AA seq
414 aa
AA seq
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MLLTVIAFDHLIIRRVKPLKLALSRQPFTIVVGAGSPTRQDLTQGNIMKKLVFSVFVGLM
AMTASAFADITVTDVKGRTVTVPKVPERVVLSFYYEDYLAIAGPGALDKVVALSLSPWKD
WRPNQFAAYEKALPKLASIPDIGSTEDNTFSIEKVIAAKPDLLILAAWSYDALGEGTKQL
EAAGIPIVTLDYNAQTVEKHVASTLALGKLMGTQDRAEKLAKNYKDAMADVQARIQKAGP
TEKKVYVELAQKGPDEVGNSYGDTMWGALVDRLGGHNIAKGQIGNWGPLSPEYVLAQKPD
LIFLGGSEWLNKPQSVQVGFGADPAVTRQRMKAYLGRPGWSDLPAVKEGGVHAIYHGGAR
TLSDYVYAQYIAKQLYPDAFKNVDPAKNIADYYNNWLPIKADGVFVLPYEANGQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctgacggtgatcgcattcgaccatctcatcatcaggcgcgtcaagccgcttaag
ctcgcgctgagccgccagcctttcaccattgtggttggcgcaggatcgcccacccgtcaa
gatttaacgcaaggaaacataatgaaaaaactagtcttctcagtctttgtcggcctgatg
gccatgacagccagtgccttcgccgacatcaccgttaccgatgtcaagggacgcaccgtc
acggtacccaaggtgccggagcgtgttgtcctcagcttctattatgaggattatcttgcc
atcgccggacccggcgcgctcgacaaagtcgtggccctctccctctccccctggaaggat
tggcggccaaaccagttcgcggcctatgaaaaggcgctgccaaagcttgcctccattccc
gacatcggtagtaccgaggacaatacattttcgattgagaaggtgattgcggccaagccc
gacctgctcattctggcggcctggtcctatgacgcgctcggggaaggcaccaagcagtta
gaggccgccggcattccgatcgtgacgctcgactacaatgcccagacggtcgagaaacat
gtcgcatccaccttggcactcggcaagctgatggggacgcaagaccgcgccgaaaagctc
gccaaaaactacaaggatgcgatggcagacgttcaggcccgcatccagaaagccggcccg
acggagaaaaaggtctatgtcgaactggctcagaaagggccggatgaagtcgggaactcc
tacggcgatacgatgtggggcgcgctggtcgacaggcttggtggccataacattgccaag
ggacagatcggcaattgggggccgctaagcccggaatatgtcctggcacaaaagccggac
ctgatttttctgggcgggtcggagtggctgaacaagccgcaatcggtgcaggtcggcttt
ggggctgatccggcggttacccgccaacgcatgaaggcctatctcggacgtccggggtgg
tcggatctgccagccgtaaaagagggcggcgtgcatgcgatctaccatggcggcgcacgc
acgctgtccgactatgtgtatgcgcaatatatcgccaaacagctctatccggatgccttc
aagaacgtcgatccggcaaagaacattgctgattattataataattggctgccgatcaag
gccgacggtgtgtttgttctcccttatgaagcgaacggacaatga
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