Agrobacterium vitis VAT03-9: RvVAT039_pl02060
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Entry
RvVAT039_pl02060 CDS
T08809
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avv03000
]
RvVAT039_pl02060
Transcription factors [BR:
avv03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RvVAT039_pl02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
BCH67373
LinkDB
All DBs
Position
pRvVAT039a:215450..216364
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AA seq
304 aa
AA seq
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MLGHSVDKYVTGSMLETSNAHGWTNLLAERWSHAPGELPSLVPRETEIAILLRGRSVVDR
IGGGMRQYTQARPGTIWLCPAGIEEEFINVTESIDDCLHIFLSGQPFDETILREHDIDPA
RVELRYESIASDPFIEFIATEILKEMAEESPAGRLLMETLAISLSAHLIKRYSATDLRPK
QPSAQDRPLDQKRLSRVKDYIDAHLENDFTVVDLATIACMSVAHFARSFRAATGKTPHNY
VRDLRLELAKQRLTRDDSHIAEIAFAAGFSSQANFTKAFRSATGLTPAKFRVMTALRTPQ
RNRN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctcggacattccgtcgataaatatgtgaccggatccatgctggagacatccaatgcc
cacggatggaccaatctgctcgccgagcgctggagccatgcgccgggtgaactgccttcg
ctcgtgccacgcgaaaccgaaattgccatcctgctacgcggtcgatccgtggtggatcgt
atcggcggcggcatgcgccaatacacccaggcgagacccggcacaatctggctctgtcct
gcagggatcgaggaagagttcataaacgtcaccgaatcgatcgatgactgcctgcacatc
tttttatccgggcagcctttcgacgagacaatcctgcgcgaacacgatattgatccggcc
cgcgtggaactgcgctacgagagcatcgccagcgacccgttcattgaattcatagcgacc
gagatcctcaaggaaatggcggaggaaagccctgccgggcggttgctgatggaaaccctg
gccatttccctgtctgcccatctcatcaagcggtattccgcaaccgaccttcgtccaaaa
cagccttcagcacaggatcggccgctagaccagaagcgcctttcgcgggtcaaggactat
atagacgcgcatctggaaaatgatttcacagttgtcgaccttgccactattgcctgcatg
agcgtggcacactttgcccgcagttttagggctgcgaccggcaagactccccataattat
gtgagggatttgcgcctcgaactcgcaaaacagcgcctgacacgcgatgacagccatatc
gcagagatcgcttttgcggcaggcttctcgtcacaggccaatttcacaaaggcctttcgg
agcgctaccggcctcactccggcgaagttccgcgttatgacagctcttcgaacaccgcaa
cggaacagaaattag
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