Agrobacterium vitis VAT03-9: RvVAT039_pl02440
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Entry
RvVAT039_pl02440 CDS
T08809
Name
(GenBank) transcriptional regulator
Organism
avv
Agrobacterium vitis VAT03-9
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
HTH_11
HTH_24
HTH_29
HTH_AsnC-type
MarR
Xre-like-HTH
FAM167
Motif
Other DBs
NCBI-ProteinID:
BCH67411
UniProt:
A0AAN1X5Z1
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All DBs
Position
pRvVAT039a:complement(259842..260858)
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AA seq
338 aa
AA seq
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MTQARTPSGFASAIVLAYQKRGMTAQPALLAAGIDPATLHADGRITADQLERLSDHAMRE
LDDEALGWFSHRLPWGSYGMLCRASLPSATLGIAIARWCRHHNLITQDVTFSLETRRNLA
EVRIEEKSELGAFREFCLVSLLRNLQGVASWLGDTRIPLIDVAFPFDAPAHAESYRYLFN
GPASFGADQASLRFDAAYLGLPVLRDDAALRQMLRRPLPLMVRQYRRDRLLSREILRLLN
DMPAAGVDDLAEKLNLSTRSLHRHIKQEGTSFQALKDLSRQRLAERLLASTQWPIKRIAR
ECGFDAEASFVRAFKSWTGQTPRAFAVAARQGTSSHRA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggcgagaacgccgtctggctttgcatcggctattgttttagcctatcaaaag
cgcgggatgacagcgcagccagcgctgctcgcggcaggcattgatcccgccaccctgcat
gcagatggcagaatcaccgcagatcaactcgaacgcctgtcagatcacgccatgcgcgag
ctggacgatgaggcgcttggctggttttcccaccgcctgccgtggggcagttatggcatg
ctttgccgcgcatctctgccctcggccacgctgggcattgccatcgcgcgttggtgccgc
catcataacctcatcacgcaggatgtgacgttcagtctcgaaacgcgacgcaatctggct
gaggtgcggatcgaagaaaagagcgaacttggcgcttttcgggagttttgtctggtcagc
ctgctgcgcaatcttcagggggtggcctcgtggctcggcgacacgcgcattcccttaatt
gatgttgcgtttccattcgacgcaccagcgcatgctgagagttatcgctatctcttcaat
ggtcctgcgtcatttggcgcggatcaggcaagcctgcgttttgatgcagcctatctgggc
ctgcctgtcctgcgcgatgatgcggccttgcgacaaatgcttcggcggcctttgccgctg
atggtgcggcagtatcggcgcgaccgtctgctctcgcgcgaaattctccgcttgctgaat
gacatgccagcagcgggggttgatgacttggccgaaaagctcaatctgtcaacccgcagc
ctgcaccgccatatcaaacaggaaggcacatcgtttcaggcgctgaaagacctttcgcgc
caacggctggcagagcgactgctggcttcgacacagtggccgatcaagcgcattgcccgc
gaatgcggctttgatgcagaggcaagttttgtgcgcgcgttcaagtcctggactggccag
accccacgggccttcgcggttgcggcaaggcagggtacatcatcgcatagggcgtga
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