Agrobacterium vitis VAT03-9: RvVAT039_pl02480
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Entry
RvVAT039_pl02480 CDS
T08809
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00280
Valine, leucine and isoleucine degradation
avv00650
Butanoate metabolism
avv00907
Pinene, camphor and geraniol degradation
avv01100
Metabolic pathways
avv01120
Microbial metabolism in diverse environments
avv04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RvVAT039_pl02480
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RvVAT039_pl02480
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RvVAT039_pl02480
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RvVAT039_pl02480
Enzymes [BR:
avv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RvVAT039_pl02480
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
BCH67415
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All DBs
Position
pRvVAT039a:265403..266317
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AA seq
304 aa
AA seq
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MHQTSDDNIVIVEVGPRDGLQNEAAIVSTDVKIELVKRLARAGLDHIEATAFVSPKWVPQ
MADSTDVMTACASATELSHVTLSALTPNLKGFEAAIAAGSREVAVFASASETFSRHNINC
SIDDSFTRFEPIFEAARAVGIPVRGYVSCVIACPYEGAIDPHAVARVSRLLLEKGTREIS
LGDTIGVGTPAKVKRMLEAVAAEAPLSALAGHFHDTYGMGIANIQAALDAGIRVFDSSIG
GLGGCPYAAGAAGNVATEEVVYLLQDLGLCRDINLPRLAETAAWISHITGRTDVSRVTKA
LMGS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaaccagcgacgacaacatcgtcattgtcgaggttggcccaagagacggtttg
caaaacgaagccgctattgtttcgaccgatgtgaagatcgaattggtgaaacgtctggcc
agagccggccttgatcacattgaagcaaccgcttttgtgtcgccaaaatgggttccgcaa
atggccgatagtaccgatgttatgacggcttgcgcctcggcaacggagctttcgcatgtc
accctctcggccctcacgcccaatctcaaaggtttcgaggccgccattgctgccggaagc
cgcgaggtggcggtgtttgcctctgcctccgagaccttctcccggcacaatatcaattgc
tcgattgacgactccttcacgcgcttcgagccgattttcgaggcggcgcgggctgtgggc
attccggtgcgcggctatgtttcctgcgtcatcgcctgcccttatgagggcgcgattgat
ccgcatgctgtcgcgcgcgttagtcgtcttttgctggaaaaaggcacccgcgaaatctcc
cttggcgacacaatcggggttggaacacctgctaaggtcaagcgcatgcttgaagcggtg
gcggcagaggcacccctatcggcgctggcaggacatttccacgacacctatggcatgggg
atcgccaatattcaggccgcacttgatgcgggcatccgtgtgttcgacagctccatcggt
ggccttggcggctgcccctatgccgctggcgcggctggcaatgttgcgacagaggaagtg
gtctatctgctgcaagacctcggcctgtgccgcgatataaacctgcccagactggctgaa
actgccgcatggatcagccacatcaccggacgaacggatgtctcgcgtgtcacaaaagct
ctgatgggcagttaa
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