Agrobacterium vitis VAT03-9: RvVAT039_pl02720
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Entry
RvVAT039_pl02720 CDS
T08809
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
avv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_pl02720
03070 Bacterial secretion system
RvVAT039_pl02720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl02720
02044 Secretion system [BR:
avv02044
]
RvVAT039_pl02720
Transporters [BR:
avv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RvVAT039_pl02720
Secretion system [BR:
avv02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RvVAT039_pl02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
ABC_ATPase
AAA_22
AAA_21
PRK
AAA_16
AAA_18
AAA_29
AAA_30
DUF3270
DUF87
MeaB
Motif
Other DBs
NCBI-ProteinID:
BCH67439
UniProt:
A0AAN1X5C9
LinkDB
All DBs
Position
pRvVAT039a:complement(289268..291340)
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AA seq
690 aa
AA seq
DB search
MANPAYLSRELAIGERETEADDLLRAAKFVGMKARFVSKVDEKRLRSVPVPTIVRDQQGR
FWLLAGRDPDGTFRVVDAVNRITRALSYSDFKSAFRPELILVQRRLAGRGIDPKTFGFRW
FLPSIWRYRLPLGHVLIASLFVQLFALITPLFFQVVIDKVLVHKGHETLIVLCVGLVILG
LFDVTLQYLRTYALNHTTSRIDAELGRRLFQHLFSLPMSYFEMRPAGQTVARVRELETIR
SFLTGQALFSAIDLLFTFIFIAVLFLYSWFLALIVVCSIPVYLLISTLIRPLLREKINEK
FNKGAESQQFLVETIVGAQTVKASAVEPMLRAQWEEKLASYIRTSFDASLLASIGQNAIQ
YVNKLTSALLLLFGATAVINGTLSVGELIAFNMISGQVVQPILRLSQLWQDFQQVQVSVE
RLGDILNSPPEPMPASNPGLARPKGAIELRSVNFSYQPNGAAVLQNISLAVKPGEVIGIV
GASGSGKSTVTKLVQRLYPPNSGQVLVDGMDVAHADPAWLRSNIGVVLQENLLFNRSIHD
NIAFADPAMSRAHVIKVAKLSGADDFINRMPLGYDTSIEERGANLSGGQRQRIAIARALA
TNPPILIFDEATSALDYESERIILDNMQHMVKGRTVLIIAHRLGTVRRCNRIIGMAEGKI
MEVGTHDELIKRPDGLYAHLWALQNDQSRV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcccgcatatctgagccgggaattggccattggtgagcgcgaaacggaggcc
gatgatcttttgcgggctgcaaagtttgtcggtatgaaagcgcgttttgtttcgaaggtg
gatgaaaaacgcctgcggtctgtgccggtgcctactatcgtcagagaccagcagggacgc
ttttggcttttggctggcagagatccagatggcacgtttcgggttgtcgatgccgtcaat
cgaataacccgtgctctgagctacagcgatttcaagagtgcttttagacctgaactgata
ttggtgcagcgtcggctggcgggacggggcattgatccaaagacatttggatttcgctgg
tttttgccatccatctggcgctaccggcttcctctcgggcacgttctgatcgcgtcgctg
ttcgtgcagctgtttgcccttattacgcctctgttttttcaggtcgtgatcgacaaggtg
cttgtccacaaggggcatgaaacgctcattgtgctgtgcgtcggccttgtcattctaggg
cttttcgacgtgacgctgcaatatttgcgcacctatgcactcaaccatacgaccagccgc
attgatgcagaactgggcagacggctgtttcagcacttgttcagtcttccaatgagctat
ttcgagatgaggccagcagggcaaacggtggcgcgggtccgtgagcttgaaacaattcgg
agctttctcacagggcaggccctgttttcagcaattgatctgctcttcacttttattttt
atcgccgtcctgttcctgtattcgtggtttttggccctgattgtcgtgtgcagcattccg
gtctatttgctaatcagcacgcttattcgcccgctccttcgtgaaaagatcaacgaaaag
ttcaataagggcgcagaaagccaacaattcctcgtcgaaacaatcgttggtgctcagacg
gtcaaggcctctgctgttgagcccatgcttcgagcgcagtgggaggaaaagcttgcctcc
tatattcgcacgtcttttgatgcgagcctgttggcgtcgattgggcagaatgccattcaa
tatgtcaacaaactcacgtctgcacttttgttgctgttcggagccactgcggttatcaac
ggtacgctcagtgttggcgaattgattgccttcaatatgatctctgggcaggttgtacag
ccgattttgcgcctatcccaactgtggcaagactttcaacaagtgcaggtctctgtcgag
agattgggtgatattctcaactcaccaccggagccgatgccagccagcaatccgggtctt
gcccgaccgaaaggagcgattgagctgcgttctgtcaacttttcctatcagccgaatgga
gccgcagttcttcagaatatctcgctggcagtcaagccgggcgaggttattggcattgtc
ggtgcttcagggtcgggcaaatcgacagtgacaaaacttgtccagcggctctatccgccc
aacagcggtcaggtgttggttgatgggatggatgtcgcccatgcagatccagcctggtta
aggtcgaatattggtgtggtgctacaggaaaatcttttgttcaatcggagcattcacgac
aatatcgcctttgccgatccggcaatgtcgcgagcgcatgtgatcaaggttgctaagctt
tctggcgctgatgactttatcaatcgtatgccgctgggctatgacacaagcatcgaggag
cgcggggcaaatctgtcgggcggtcaaaggcagcgcattgcaatcgcccgtgccttggcg
acaaatccgcctattctgatctttgacgaagcgaccagcgctcttgattacgaaagcgag
cgcatcattctggacaatatgcagcatatggtgaaggggcgcacagttcttatcattgcg
catcgattgggaaccgttcgtcgctgcaatcgcatcattggcatggctgagggcaagatc
atggaggtgggaacccatgatgagctcataaaacgtcccgacggcttgtacgcccatctt
tgggcgttgcaaaacgatcagtcgcgggtttag
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