Agrobacterium vitis VAT03-9: RvVAT039_pl03470
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Entry
RvVAT039_pl03470 CDS
T08809
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAT039_pl03470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl03470
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RvVAT039_pl03470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
TAT_signal
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
BCH67514
LinkDB
All DBs
Position
pRvVAT039a:370331..371626
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AA seq
431 aa
AA seq
DB search
MSNQKRKGITRRGLIKGAAAVGGMAAGSGAISGFPTIWAQNIKDIKLVHVGQSYSTIKNI
QEQASKDLGFTIEMQTADVATQMNRMLTQPESMDVADLANTSVRYLLGRNIVQPVTTKEY
KWWDKTISLFQTGKYPNGKMASLEGFAPIKAQYYANKTASAYSMTPTEWLVGIPLYYNAD
TLGVRPDLIGSTKIDSWARLLDPAFKGHVALQEGVNVGLPDAAMALSALGEVSYVDKGNM
TRSEIDKTIKKLIEYKKAGQFRSFWLNFDQSVQLMASGEVVLQSMWSPAVTEVRTRGIAC
TFQPLKEGHRGWYIMMFQMQHLTGLKRECAIEYMNWYNSGWAGAFISRQGFYNTVPENVK
PLMSANEYGYWYEGKPASEPILNPFGKVMEKPGAVRDGGSLWDRMGNIGIWNTLMDEDRY
LVRRWQDFIAA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccaaaagcgcaaggggataacacggcgcggattgatcaaaggcgcggcagcg
gtgggcggcatggccgccgggtccggggccatatctggatttccaacaatctgggcgcag
aatatcaaggacatcaagctggtccatgttggccagtcctattccaccatcaagaatatt
caggaacaggccagcaaggatctcggctttaccattgaaatgcagacggcagacgtcgcc
acccagatgaaccggatgctgacccagccggaatcgatggatgtcgccgaccttgccaat
acgtctgtacgctatctgctcggccgcaatattgttcagcctgtcaccaccaaggaatat
aaatggtgggataagaccatttccctgtttcagacaggtaaataccccaatggtaaaatg
gcctcgctggaaggatttgcaccgatcaaggcgcaatattatgccaataagaccgccagc
gcctattcaatgacgccgacagaatggctggtgggcattccgctctattataatgccgat
acgctgggtgtgcggcccgatctgatcggctccaccaaaatcgacagttgggcacgcctg
ctggaccctgccttcaagggccatgtggcgcttcaggagggggtcaatgtcggcttgccg
gatgccgccatggcgctgtccgccctgggcgaggtctcctatgttgacaagggcaatatg
acccgcagcgaaatcgacaaaaccatcaagaaactgattgaatacaaaaaagccgggcaa
ttccgctccttctggctgaatttcgatcaatccgtgcagctgatggcctccggcgaagtg
gtgctgcaatccatgtggtcgcctgctgtgacggaggtgcgtacgcgcggtattgcctgc
acgttccaaccgctgaaagagggccatcgcggctggtacatcatgatgttccagatgcag
catctgaccgggctgaagcgagaatgcgccatcgaatatatgaactggtacaattccggc
tgggccggcgccttcatttcccgccaaggcttttacaataccgtgcctgaaaatgtgaag
ccgctgatgagcgccaatgaatatggctattggtatgagggcaagcccgcgtccgaacct
attctcaacccctttggcaaggtgatggaaaagccgggtgcggtgcgcgacggcggctca
ctctgggatcgcatgggcaatatcggcatctggaacacgctaatggatgaggatcgctat
ctggtgcgccgctggcaggatttcatcgccgcgtaa
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