Agrobacterium vitis VAT03-9: RvVAT039_pl04400
Help
Entry
RvVAT039_pl04400 CDS
T08809
Symbol
nocT
Name
(GenBank) nopaline-binding periplasmic protein
KO
K10018
octopine/nopaline transport system substrate-binding protein
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RvVAT039_pl04400 (nocT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avv02000
]
RvVAT039_pl04400 (nocT)
Transporters [BR:
avv02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
RvVAT039_pl04400 (nocT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
Lig_chan-Glu_bd
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
BCH67607
LinkDB
All DBs
Position
pRvVAT039a:467884..468735
Genome browser
AA seq
283 aa
AA seq
DB search
MTFRRMAALAVAFTTLIFGSASMAQDAPTEIKIATEGAYAPWNFTTSDGKLDGLEIELAN
DLCARMKIKCTIVAQDWDGLIPSLTVGKFDVIMASMFITPKRLETIDFTQPYAVDPSGFA
VPKDSALGKLGISTEKFKLEDEAPSKAAIDKLKSLLKGKVVGVQAATTNLDFLRKYFADT
VEIREYKTTEQHDLDLAAGRIDAIFAQQTALAATLAKPEFADYTIAGPGFVGGVFGLGTG
AGLRKQDTKLKEMLNTAISSAIADGTIKSLSEKWVKTDVTPVK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcgtcgcatggccgcgttggcggtcgccttcacgacactgatctttggctca
gccagtatggcgcaggacgcgccgaccgagatcaaaattgcaaccgaaggagcttatgct
ccgtggaatttcacgacctccgacggcaagctcgatggccttgaaatcgaactcgccaat
gatctctgcgcacgcatgaagatcaaatgcaccatcgttgctcaggattgggacggtctt
attccgtcgctgacggttggcaagttcgatgtcattatggcgagcatgttcatcacgcca
aagcgtcttgagacgatcgattttacccagccttatgcggtggatccttcgggttttgct
gttcccaaggatagcgcgcttggcaagctcggcatctcgacagaaaaattcaaacttgag
gatgaggccccctcgaaagcggcgatcgacaagttgaaatccctcctgaagggcaaagtt
gttggcgttcaggccgcaacgacaaatctcgattttctgcgtaagtattttgccgatacc
gtagaaatccgcgagtacaaaaccacagagcagcatgacctcgacttggcagctggtcgc
attgatgcgatcttcgcccagcagacggcactggccgcgacactcgcaaagccagaattc
gcagactataccattgcaggccccggcttcgtgggcggcgtcttcggccttggaaccggt
gcgggattgcgcaagcaggacaccaagctcaaggagatgctgaacaccgcaatctcctcg
gctattgccgacggaaccatcaaaagtctctccgaaaaatgggtgaaaaccgacgtgaca
ccggtcaagtaa
DBGET
integrated database retrieval system
