Agrobacterium vitis VAT03-9: RvVAT039_pl04990
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Entry
RvVAT039_pl04990 CDS
T08809
Name
(GenBank) hypothetical protein
Organism
avv
Agrobacterium vitis VAT03-9
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BCH67666
LinkDB
All DBs
Position
pRvVAT039a:551148..557729
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AA seq
2193 aa
AA seq
DB search
MNSADPILALRARVAALSPAEREAFRRQLEARGIAWERVAPEETPQETSRVSTRPARLPL
TPGQKHFWLQQSLYPESSAYHVAYRWRFEGPLDRAALERSLATIVSRHAPLRTAFPVEAG
EPWQEVHPNHAFALGFTDLEATGEDGEALALAVATEPFDLSKAPLIRAHLFRQNESEHLL
AITLHHIVADGWSRGVLMRELTACYRAYRAGAAPALSPITRDFGDLVLDQHAWLQSRDCG
RDRDYWKQTLADLKPLELPSDRSRSSSIDMTAATVTRVIPVSVSSQVASLASQLGTTPFV
VMAAAFSLLLHRYSGERDLSVCVPVAGRDDPDAAGLIGLFTNTLVLRAQLDPRMTFSQWV
GVVQERFSDALDHQAFPFPLIAEALGMSRDQRQNPLSQVMFQLQSQDYRAQNAEQIDFGI
DGLIVRQQPARLSETKVDLSWYVMERESGYLLNIEYRVAIFDSWRIERMAAHFEVLLGSI
LQSPNALLPRLAYLSKEEQAAVVALGTPTARPVPDITMHDAIAHVARLQPDAIALESKGR
SWTYGELQKDVDALAATLVSLSVHPGDRVAVSLPGRGQSVIAFLAILKAGAVYVPLDPDH
PADRVAYVLEDSGVSLVLTDRADLYPAQRSLDPTRPLPVSETPAALPPSDPARIAYLLYT
SGSTGRPNGVPIGHASLLNHLRSMAVTPGLAPGDRLLAITTPTFDISILEMLLPLSVGAT
TVLYGQDLLLAPQRLADVLVTDRISHLQATPAYWRMLIDSGWEGLPHLIALCGGEALDAP
LARKLIDRTKELWNVYGPTEATIWASALRVTHAHAESGKVPVGGLLDNTHLHVLDAYMQP
LPRGIGGELYIGGPCLSPGYWNRPALTAARFVPNPFYDENSPALRLYRTGDAVVRLANSE
IEFIGRTDFQVKLRGYRIEIGEIEDKLLRESVVEQAIVTLDAENERLIAYVLVRDWPTTN
DGEIERKLRQSLSAQLPRYMVPAAFVILEEFPLNPNGKVDRKKLPIPKLSMTRAELIPAR
NAIEATLLEIWKAVLRREDIGIEDNFFDLGGDSIIGVQIVAKAQAKGLKLEPTQIFELQT
IAAQAEAAVAESAAQTIEVQTSEVAESGSSFEMTPVQAGMLFHSLMAPASGTYIEQCWCV
LEGPLDADAFKSAWGRVIARHEVLRGACRWMDVERPIMVIAENVVPEWREADWSGEDAAG
QETAFAAWLEADRRCGFTLDAAPLLRFALIRLGPGRHRFVWSFHHLLMDGWCGSLLVGEM
LKAYAGESLPAPPPSYRQYVAWRDRQDISSAQAYWSHALADLPQGGFLGETKIGEAAQEA
IVEIRRSLDASLATRLAAMARRERLTLATVLQGAWALLLSRYGAEDDVIFGTVLSGRPPD
LPDADRMIGLFLNTVPFRAQTRPEERVAEWLQGLQAAHRQREKHGHAALADIQRWAGKTA
DQPLFDTLLIIENLPLSMQAAFAEGTHTLTLSDPGSYERTHYPLSLRIFPGAEIEIALAA
DPSRLSSTRADRLLRHYETLLSSIADDPQACLGTIEMLKPDERDILLQTGRGPQTQPCAA
VHDQIIARAKGEPGKAAVVQVGEGRDSTMSYGDLAGYAEALALRLYQQGIGRGAVVAVYL
RRGSALLPSLLAVMRSGAAYLPIDPDYPAERIAYMLADSGAALVLTDLGDRERAVIPQDV
PVLDPTQAFGCAQASFEPAAVQADDLAYILYTSGSTGQPKGVAITHGALANFIESMADRP
GIGADDRLLALTTIGFDIAGLELFAPLSQGATVLLADSAIARDGRRLAALVDRVRPSVMQ
ATPAGWRMLIEAGWPSEKGHKKGHEEGHGKGLRMLCGGEALDSLLAAELLDRGDCLWNLY
GPTETTIWSAATEVRREDLNGHSVTVAGPIQNTQLYVLDRRGEPVPPGTPGELHIGGAGL
SPGYWGKPGLTADRFIPNPFRRGPQDGYHLYRTGDLVRLAENGALDFLGRIDNQVKLRGY
RIELGEVEARLAAHPRVAEAAVLVEDGGAGKQLIAYLRWREPFVGDASAELGPHMADSLP
LYMLPSAYVALDAFPLTPNGKVDRRALPAFRPKPAQRQTHLPISGEPAATLAAIWREALK
LDHVNPGDNFFECGGHSLLVVSLQGVIGKRFGVSIDITAFFQFPTLETLAAHIAQLQAGR
EGEWSGGDRTLLRQTGRDRLADRRGLRAERTGA
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
gtgaactctgccgatccgattctggcgctgcgcgcccgcgttgcggcgctcagtcctgct
gagcgcgaggctttccgccgccagctcgaagcccgtgggatcgcctgggaacgggtggcc
ccggaagagacgccacaagagacgtcaagggtgtcaacgcgccccgcccgcttgccgctg
acacccggccagaagcatttctggctccagcagagcctctatcccgagagttctgcttat
cacgtcgcctatcgctggcggtttgaagggccgcttgatcgcgcagcgctggagcggagc
cttgcaacaatcgtttcccggcatgcgccgctcagaaccgcctttccggtggaggcaggc
gagccgtggcaggaggttcatcccaaccacgcttttgctctgggctttaccgatctggaa
gcgacaggcgaagatggagaggcactggcgctggctgttgcaactgagcctttcgatctc
tcaaaggcaccgctgatccgggcacatctcttccggcagaatgagagcgaacacctgctg
gcgatcaccctccatcacatcgttgcggatggctggtcacgcggcgtgctgatgcgcgag
ctgacggcctgctaccgcgcctatcgtgcgggtgccgcgcccgcgctttcgcccatcacg
cgcgattttggggatctggttctcgatcaacacgcatggcttcagagccgggattgcgga
cgagaccgcgactactggaaacaaaccctcgccgatctcaagccgctggaattgccaagc
gaccgatcccgcagcagcagcattgacatgacggcggccaccgtgacacgggttattccc
gtctcggtgtcgtcgcaggtcgcctcgcttgccagccagcttggaaccacgccttttgtg
gtgatggctgcggccttttcgctgctgcttcatcgctacagtggcgagcgtgacctgtcg
gtctgcgtgcccgtcgccggacgggacgatccggatgccgcagggctgattggtctgttc
accaacacattggtgctccgcgcgcaactcgacccgcgcatgacgttttcgcaatgggtc
ggggttgttcaggagcgcttctcggacgcgctcgaccatcaggcatttccctttccgctg
attgctgaggcacttggcatgagccgcgaccaacggcagaacccgctctcgcaggttatg
ttccagttgcagtcgcaagactaccgcgcacagaatgccgagcagatcgatttcggcatc
gacggtctcattgttcgccaacagccagcacggctgagtgaaacaaaggtcgatctcagc
tggtatgtgatggagcgggaatccggctatctgctgaacatcgaatatcgcgtggcgatc
tttgattcatggcggatcgagcgcatggcagcccatttcgaggttttgctcggctccatc
ctgcaatctcccaatgctctgctgccaaggcttgcctatctatcaaaggaagagcaggcc
gccgtggttgcacttggaacgccaaccgcgcggcccgtgcctgacatcaccatgcacgat
gctatcgcacacgtcgcccggctccaacccgatgcgattgcactggaaagcaagggtcgc
agttggacctatggcgaactacagaaagacgtggacgcacttgccgccacgctcgtcagc
ctttcggttcaccccggcgatagggtcgccgtttcgctgccgggcaggggacaatccgtc
attgccttccttgccattctgaaagcgggtgcagtctatgttccgctcgatcccgatcat
ccagcggaccgggttgcctatgtgcttgaggattccggtgtcagtctcgtattgacggat
agggcagatctctatccggcccagcgctcccttgatccgacccgcccgctgccggtgagc
gagacccctgccgcgctgccgccctctgatcccgcgcgcatcgcctatcttctctacacc
agcggcagtacgggccgaccgaacggcgtgccgattggccatgcaagcctgctcaatcac
ctgcgctccatggccgtcacgccggggcttgcgcccggtgatcggcttttggcaatcacc
acgcccaccttcgacatttccattctggaaatgctcctgccgctcagcgtcggcgcgacc
accgtgctttacggccaagacctgctgcttgcgccacagcggcttgccgatgtgcttgtc
acggatcgcatctcgcatttgcaggcaacgcccgcctattggcgcatgttgatcgacagc
ggctgggagggattgccgcatctgatcgccctttgcggcggcgaggcactggatgcaccg
cttgcccgcaagctgattgatcgcacgaaagagctatggaacgtctatgggccgacggag
gcgacaatctgggcaagcgcgctcagggtcacccacgcccacgcggaaagcggcaaggtg
ccggttggtggcctcctcgacaatacccacctccacgttctcgacgcctatatgcagccc
ttgccgcgcggcattggcggcgaactctatatcggcgggccgtgcctcagccccggttac
tggaaccgcccggctctcacagccgcccgtttcgtgccgaacccgttctacgatgaaaac
agccccgcgctgaggctctatcgcaccggcgatgcggttgttcgtctggcaaatagcgag
atcgaatttatcggccgcacggattttcaggtcaagctgcgcggctaccgcatcgagatc
ggtgagattgaggacaaattgctgcgcgaaagcgttgttgagcaggccatcgtcacgctc
gacgcggaaaacgagcggctgattgcctatgtgctcgttcgcgattggccgacaacgaac
gatggcgagattgagcgcaagctgcgccagtcgctgtctgcgcaattgccgcgctacatg
gtgccggccgcctttgtgattttggaggagtttccgctcaatccgaatggcaaggtggat
cgcaaaaagcttccgatccccaagctttccatgacgcgcgcggagctaattccagcccgc
aatgccatcgaggcgacgctgctggagatatggaaggccgtgttgcggcgggaagatatc
ggcatcgaggacaatttcttcgatctcggtggtgactccattatcggggttcagatcgtt
gcgaaggcgcaagccaaggggctgaagctcgaaccgacccagattttcgagttgcagaca
atcgcggcacaggcagaggccgccgttgccgaaagcgcggctcagacaatcgaggttcag
acaagcgaggttgccgaaagcggctccagcttcgagatgacgcccgtgcaggcgggcatg
ctgttccacagtctgatggccccagcctcaggcacctatatcgagcaatgctggtgcgtg
ctggaaggcccgctggatgccgatgccttcaaatcggcgtgggggagggtgatcgcccgc
cacgaggtcttgcgcggtgcctgccgctggatggatgtcgagcggcccatcatggtcatt
gccgagaatgttgtgccggaatggcgcgaagcggactggtcgggcgaagacgcggcaggg
caggagacagcctttgcggcatggctggaggcggatcgccgttgtggctttacgctggat
gctgcaccccttttgcggtttgcgctgatccggctcggtcccggccgccatcgcttcgtc
tggagtttccaccatctgttgatggacggctggtgcggctcgctcttggtcggtgaaatg
ttgaaggcttatgcaggcgaaagcctgccagcgcctcccccatcttatcgccaatacgtc
gcgtggcgcgaccgacaggatatctcttctgcgcaagcctattggtcgcatgctcttgcc
gatctgccgcaaggcggatttttgggtgagacaaaaattggcgaggcggcacaggaggcc
attgtcgagatcaggcgcagccttgatgccagtctcgcaacgcggcttgccgccatggcg
cggcgggagcggctgacgctggcgactgtgctacagggggcctgggcgctacttctatcg
cgctatggggccgaggatgatgtgatctttggaacggttttgtcgggccgcccgcctgac
ctgccagatgcagaccgaatgattggcctcttcctcaacacggtgccgtttcgtgcccag
acacgaccggaggagagggtggccgaatggcttcaaggccttcaggctgcgcatcgccag
cgggaaaagcatgggcatgcagcgcttgccgatatccagcgctgggctggcaagaccgcc
gatcaaccgcttttcgacacgttgctgattattgagaacctgccgctttcgatgcaggcg
gcctttgcggaaggaacgcacacgctcaccctcagcgatcccggcagctatgagcgcacg
cattacccgctgtcgctccggatctttcccggtgccgagatagagattgcgcttgccgca
gacccatcccgtctgtcgtccacaagagcggatcgtctgctgcggcattacgagactttg
ctctcatccatcgccgatgatccgcaagcgtgccttggcacaattgagatgctaaagccc
gatgagcgagacatcctgctccagacgggccgaggtccgcagacgcagccatgtgctgcc
gtgcatgaccagatcatcgcacgggcgaaaggcgaaccgggcaaagccgccgtcgttcag
gtgggtgagggccgcgatagcaccatgtcctatggcgatctcgcaggttatgcggaggct
cttgcccttcgtctttaccagcaaggcattggccggggcgcggtcgttgcggtctatctg
cggcgtggaagcgcattgctgccctctctgctggccgtcatgcgatcgggtgctgcctat
ctgccaattgatcccgactatccggcagagcggattgcctacatgctggccgattctggt
gcagcgctggtgctgacggatcttggggaccgtgagcgggcggttataccgcaagatgtt
ccggtgctggacccgacccaggcattcggttgtgcgcaggcatccttcgagcctgctgcg
gtgcaggccgatgatctcgcctacattctttataccagcggcagcaccggccagcccaag
ggcgtggcaatcacccatggtgcgcttgccaatttcatcgagtccatggccgacaggccg
gggattggcgcggacgaccgcctgctggcgttgaccacgattggcttcgacattgcgggg
ctggaattgttcgcgcccctttcgcaaggcgcaacggtgctgcttgcggacagcgccatt
gcccgcgacggtcggcgtcttgccgcgctcgtggatcgcgtccgtccaagtgtcatgcag
gcaacgcccgccgggtggcgcatgttgatcgaggcggggtggcccagtgaaaaggggcat
aaaaaggggcatgaagaggggcatggcaaggggcttcgtatgctgtgcggcggcgaggcg
ctggacagccttcttgcggccgagttgctggatcggggcgattgcctgtggaatctttac
ggtccaaccgagacgaccatctggtctgcggccactgaggtgcggcgtgaagacctcaat
ggtcacagcgtcacggttgcaggccccattcagaatacccagctttatgttctcgaccgg
cgcggggaacccgtaccaccgggcacgccgggagaattgcacatcggcggtgcgggattg
agcccgggctactggggcaaacccggcctgacggcagacaggttcatccccaaccctttc
cggcgtggtccgcaggacggctaccatctataccgtactggcgacctcgtgcgcttggcg
gagaatggcgcgctcgattttctcggacggatcgacaatcaggtgaagctgcgcggctat
cgaatcgaactcggggaggtcgaggcaaggcttgcggcccatcctcgcgttgccgaagcg
gcagtgcttgttgaggatggcggtgctggcaagcagcttatcgcctatctgcgttggcga
gagccatttgtcggcgatgcaagcgcggagcttggaccccatatggccgatagcctgccg
ctctacatgctgccatcggcctatgtcgcgcttgatgcctttccgctgacgccaaacggc
aaggttgatcgccgcgcacttccggccttccgaccaaaaccggcacagcggcaaacgcac
ctgccgatctctggcgaacccgcggcaaccctcgccgccatctggcgagaggcgcttaaa
ctcgaccacgtcaatccgggggacaatttcttcgaatgcggcggccattcgctgcttgtt
gtttctttgcagggggtgatcggcaagcgttttggagtatcgattgatattacggccttt
ttccagtttccgacgctggaaactctggctgcccatatcgcgcagctccaagccggtcgt
gaaggcgaatggtctggaggtgatagaaccctcttgcgccagacgggccgcgatcgcctt
gcagatcgtcgtggcctgcgggccgaacgcacaggtgcctga
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