Agrobacterium vitis VAT03-9: RvVAT039_pl05790
Help
Entry
RvVAT039_pl05790 CDS
T08809
Name
(GenBank) IS6 family transposase
KO
K07498
putative transposase
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RvVAT039_pl05790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS240
DDE_Tnp_IS66
Motif
Other DBs
NCBI-ProteinID:
BCH67746
LinkDB
All DBs
Position
pRvVAT039b:27185..27847
Genome browser
AA seq
220 aa
AA seq
DB search
MIAHAVWLYFRLPLSLRMVEDMLAARGLIVSHQTVRLWAEKFDRHFANDIRRRSAGRLGD
KWHFEEVVITIAGKKHWLWRAVDQDGFVLDVLVQSRRDAKAAKRLMRKLLKGQCRAPRVI
ITDKLRSYGAAKRDIMPGIEHRSHKGLNNRAENSHQPVRRRERIMRRFKSARHLQRFVSI
HDPIANLFHVSRHDIPSTHYRELRETAMRTWYQIAGIQAA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgattgcccatgccgtttggctctatttccggcttccgctgagcctgcggatggtcgag
gatatgctggctgcccgtggcctcatcgtctctcaccaaaccgtgaggctctgggcggag
aagttcgacaggcatttcgctaatgacatccggaggcgctcagctggcaggctcggtgac
aaatggcacttcgaagaggttgtcatcacgatcgccggcaagaaacattggctctggcgc
gccgtcgatcaggacggttttgttctcgacgtgctggtgcaaagccgccgcgatgccaag
gcggcaaagcgtttgatgcgaaagcttctgaaagggcaatgccgtgcgccgcgtgtgata
atcaccgacaagcttcgatcctacggtgcggcgaagcgtgatatcatgcccggcatcgaa
catcgctcgcacaagggcctgaacaatcgggccgagaattctcatcagcctgtccgacgg
cgtgaaaggattatgaggcgcttcaagtcagcgaggcaccttcaacggttcgtttccatc
cacgatccgattgccaacctctttcacgtttcccgccacgacattccatccacccattat
cgcgaattgcgagaaacagccatgcgaacatggtaccaaatcgctggcattcaagccgcc
tga
DBGET
integrated database retrieval system
