Agrobacterium vitis VAT03-9: RvVAT039_pl05810
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Entry
RvVAT039_pl05810 CDS
T08809
Name
(GenBank) IS6 family transposase
KO
K07498
putative transposase
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RvVAT039_pl05810
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS240
DDE_Tnp_IS66
rve
DUF6401
HTH_32
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
BCH67748
LinkDB
All DBs
Position
pRvVAT039b:31598..32299
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AA seq
233 aa
AA seq
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MQTSDISFKRHRFPAQIIAHAVWLYLRFNLSLREVEEMLLERGVDVSYETVRRWVAKFGP
QIARNLRRRQPRPGDVWHLDEAVVKCAGEKFWLWRAVDQHGTVLEEILQKRRNKKAAKRL
LVALMKRYCFVPKRIITDKLRSYGAAKADVAPRLVHWSHKGLNNRAENSHLPFRKRERTM
QGHRSTGALQRFVSMHSATRNCFSVPSRRRAAQTIRYHRLEAFDAWKIAACIP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacatccgatatcagtttcaagcgtcaccgttttcctgcgcaaatcattgctcat
gcagtctggctttacctgcggtttaatctgagcctgcgtgaagttgaggaaatgcttctt
gagcgtggtgtcgacgtttcttatgagacggtccgccgctgggtcgccaagttcggaccc
cagattgctcgcaatttgcggcggcgacagccgcgcccaggcgatgtttggcatctggac
gaagccgttgtgaaatgtgctggagagaagttctggctttggcgtgcggtcgatcagcat
ggcactgttcttgaagaaatcttgcagaagcgacgcaacaaaaaggcggccaagcgcctg
ctggtggcgttgatgaaacgctattgctttgttcccaaacgtatcatcactgataaattg
cgctcctacggcgcagcaaaggcggacgtggcaccccgcctcgttcattggtcacacaaa
ggcctcaacaatcgggctgaaaacagccacctgccgtttcgaaaaagggaacgaaccatg
cagggccaccgatcaacgggagcattgcaacggttcgtctccatgcactccgctacccgg
aattgcttttcagttccatcccgccgccgagccgcacaaacaattcgctaccatcgcctc
gaagctttcgacgcatggaaaattgcggcttgcatcccctga
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