Gillisella vitis VAT03-9: RvVAT039_pl06380
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Entry
RvVAT039_pl06380 CDS
T08809
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
avv
Gillisella vitis VAT03-9
Pathway
avv00300
Lysine biosynthesis
avv01100
Metabolic pathways
avv01120
Microbial metabolism in diverse environments
avv01230
Biosynthesis of amino acids
Module
avv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RvVAT039_pl06380 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avv01002
]
RvVAT039_pl06380 (dapE)
Enzymes [BR:
avv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RvVAT039_pl06380 (dapE)
Peptidases and inhibitors [BR:
avv01002
]
Metallo peptidases
Family M20
RvVAT039_pl06380 (dapE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
FaAP_N
Motif
Other DBs
NCBI-ProteinID:
BCH67805
LinkDB
All DBs
Position
pRvVAT039b:complement(82448..83722)
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AA seq
424 aa
AA seq
DB search
MTAIERYVETAVADLARMIEVDTSFPPGEGYHAFADLMQDLLAPMGFDCTRVIVPEELWK
VEGGPASGARTDLISSRETGKPVLGLYYHVDTVPAAPGWQRDPLKLTVEGDTLYGLGAAD
MKGTIAATLLALRAAKEAGVELAYDPMLLLCTDEEGGLYPGIRYLAEQGMLKGHILNFNG
SAAPRVWAGCFGIFNLQLTIRGHAVHAGEGNRTGAGINAIEGALPVMNALMGLKPVVAAR
ASALAPPPHATGPLRPQLTIAAVEGGTAGGQVPAEVKILVSRRYAPEESYEEARAEIEAV
INKAVTETPGLGLGIDLVGHLIPTADPDGPHWPRWQKALSVGFGYKPEDFHKWGAASCSD
FGYVQKAGFTQEVLLSGLGRPESCIHSPEEHTTKQDIVALAKSILAYLAADFAADLIPET
ASII
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgattgagcgctatgtcgagaccgccgttgctgatctcgcccgtatgatcgaa
gtcgatacgtcattcccgccaggcgaaggttaccatgccttcgcagacctgatgcaggac
ttgctagcgccgatgggctttgactgcacccgcgtgatcgtgccggaagagctctggaag
gtcgagggaggccctgcttcaggtgcgcgcaccgatcttatctcctcgcgcgagaccggg
aagccggttctcggcctttattaccacgtcgatacggttccggcagcccccggctggcag
cgtgatccgctgaagctcaccgtcgaaggtgatacgctctacggtctcggcgccgccgac
atgaagggcacaatcgccgcgacgcttctggcgcttcgggcagcgaaagaggcgggcgtc
gaactcgcttacgatccgatgctgctgctgtgcactgacgaggagggcgggctttatcca
ggcatccgctacctggccgaacagggcatgctaaagggccatatcctcaatttcaacggc
tcggccgcgccgcgtgtctgggccggatgtttcggcatcttcaacctgcaactgacgatc
cgtggccatgccgtgcatgccggcgagggcaaccgcaccggcgcaggcatcaatgcgatc
gagggcgcgctgccggtcatgaacgcactgatgggcctaaagccggtcgttgctgcccga
gcctcggcgctcgccccgccgccccatgcgacgggcccgctgcgcccgcagctgacgatc
gcagccgtcgaaggtggcacagccggcggccaggtgccggccgaggtaaaaatcctcgtc
agccgccgttatgcgccggaagaaagttatgaagaggcccgcgccgagatcgaggccgtc
atcaacaaggctgttaccgaaacgccgggccttgggcttggcattgatctcgtcggtcat
ctgatcccgactgccgatccggacgggccacactggccgcgctggcagaaggcgctgtcg
gtcggtttcggttacaagccggaagactttcacaaatggggtgcggcaagctgttcggac
tttggctacgtccagaaggccggttttacgcaggaagtgctgctgagcggtctcggccgg
ccggaaagctgcattcacagcccggaagaacatacgacgaaacaggacatcgtcgcgctc
gccaagagcattcttgcctatctcgcggcggatttcgccgccgatctcattcccgaaacc
gcatccataatctga
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