Agrobacterium vitis VAT03-9: RvVAT039_pl06570
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Entry
RvVAT039_pl06570 CDS
T08809
Name
(GenBank) phosphonate metabolism transcriptional regulator PhnF
KO
K03710
GntR family transcriptional regulator
Organism
avv
Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avv03000
]
RvVAT039_pl06570
Transcription factors [BR:
avv03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RvVAT039_pl06570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_36
MarR_2
HTH_Crp_2
Rrf2
HTH_24
HTH_IclR
Fe_dep_repress
DUF4423
HTH_20
HTH_11
MarR
PaaX
TrmB
RP-C
HTH_54
Motif
Other DBs
NCBI-ProteinID:
BCH67824
LinkDB
All DBs
Position
pRvVAT039b:102009..102890
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AA seq
293 aa
AA seq
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MTFGTPGAIIIGTLQSEPVGYKLSVTAAKSTQTGRRQILSEAASGTTASSGKGPLFRQVE
QHIKELLTSSEYGPGDRIPSERDFAETLGINRATVRRAVANLIKAGLLESNGTGGTRVAA
AKVARKLDIYRSIGVGRHITEEGGISSNKLLHFHVEKASARMAERLRIAEDDDVTILRRL
WSINQKPFCIETSYLVTKLVPDLTAEDLITGQSLYALLKSRYGYETINADRTITISYLND
LESRLLEMTPGAAVLSLRLTVETSDGQAIEYMNSLNNPKLVVFRTNEKDRSAR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
ttgacttttggtactcctggcgccattataattggaacacttcagtcagaaccggtggga
tacaaattgagcgtgaccgcagcaaaatcgacgcagacagggcgacgtcagattctttcg
gaagcagcaagcggaacgacggccagcagtgggaaaggccctctattcaggcaggtggag
caacacatcaaggaactgctcacctcttcggaatacggcccgggcgaccgtattccttcc
gaacgcgacttcgctgaaaccctcggtatcaacagggcgaccgtcaggcgagctgtcgca
aatctgatcaaagcgggcctgctagaaagcaatggaaccggcggaacgcgcgtcgctgca
gcgaaagtggcgcgcaaacttgatatctacaggtctatcggcgtagggcgccacatcacc
gaggaaggtggcatttcgagcaataaactattgcatttccatgtggaaaaggccagcgcc
agaatggcggagcgccttcgcatcgcggaggatgacgacgtcaccattcttcggcgccta
tggagtataaaccagaagcccttttgcattgagaccagctatctcgtcaccaagcttgta
ccagatttgacggctgaggatctaatcactgggcaatcgctctacgcgttgctcaaaagc
cgctatggatatgaaacaatcaatgcggaccgaaccatcaccatttcgtatctgaacgac
ctcgaaagccgtctgctcgaaatgaccccgggcgctgcagtcctgtccctgcgcctcacc
gtcgaaaccagtgatggccaggccatcgagtacatgaactcgctgaacaatcctaaactg
gtcgtctttcggacgaacgaaaaagaccggtcagcacgttaa
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